RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 TRPC5Q9UL62 973 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 CICQ96RK0 1608 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 PVALEFA0A1B0GWK0 134 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 RBAK-RBAKDNI3L0D1 243 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 TRAF5O00463 557 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 TSPY3P0CV98 308 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 TSPY8P0CW00 308 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 CTNNA1P35221 906 aaKnown RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 HSD17B3P37058 310 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 MRPL12P52815 198 aaKnown RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 RPS6KA1Q15418 735 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 SBK1Q52WX2 424 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 LRRC55Q6ZSA7 311 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 USP38Q8NB14 1042 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 TBCKQ8TEA7 893 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 LRRC45Q96CN5 670 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 OSBPL7Q9BZF2 842 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 C6orf50Q9HD87 102 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 ADAMTS1Q9UHI8 967 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 GMNCA6NCL1 334 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 CEP104O60308 925 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 TLR2O60603 784 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 PRDX5P30044 214 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 KLHL30Q0D2K2 578 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 GRB10Q13322 594 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 VPS72Q15906 364 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 PTPROQ16827 1216 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 C11orf91Q3C1V1 193 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 C1orf131Q8NDD1 294 aaKnown RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 UBLCP1Q8WVY7 318 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-206ENST00000397163 PACSIN1Q9BY11 444 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 VAT1LQ9HCJ6 419 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 PLCB1Q9NQ66 1216 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 BLOC1S4Q9NUP1 217 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 L3MBTL1Q9Y468 752 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 ATP6V0A2Q9Y487 856 aa10.05□□□□□ -0.8
CAPN3-206ENST00000397163 A0A087X0T9 212 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 KLRF2D3W0D1 207 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 NTSR2O95665 410 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 FAM228BP0C875 321 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 CALRP27797 417 aaKnown RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 TMOD1P28289 359 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 GNA11P29992 359 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 ERVK-9P63128 1117 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 IRX1P78414 480 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 PLCB4Q15147 1175 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 SLC18A3Q16572 532 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 AP1ARQ63HQ0 302 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 LRIG3Q6UXM1 1119 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 DDX42Q86XP3 938 aaKnown RBP eCLIP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 ZNF444Q8N0Y2 327 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 PROCA1Q8NCQ7 364 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 ISCUQ9H1K1 167 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 KANSL2Q9H9L4 492 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 TFCP2L1Q9NZI6 479 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 BIN2Q9UBW5 565 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 PCDHGC5Q9Y5F6 944 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 COL4A3BPQ9Y5P4 624 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 DRP2Q13474 957 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 RUFY4Q6ZNE9 571 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 FAM133AQ8N9E0 248 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 TACO1Q9BSH4 297 aaKnown RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 ZMYND12Q9H0C1 365 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 QTRT2Q9H974 415 aaKnown RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 ACTR5Q9H9F9 607 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 STK17AQ9UEE5 414 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 GGA2Q9UJY4 613 aa10.04□□□□□ -0.8
CAPN3-206ENST00000397163 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-206ENST00000397163 KLRK1P26718 216 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 FKBP3Q00688 224 aaKnown RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 ASIC2Q16515 512 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 CALCRLQ16602 461 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 TMEM266Q2M3C6 531 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 CHADLQ6NUI6 762 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 C6orf89Q6UWU4 347 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 MYOCDQ8IZQ8 938 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 MICAL1Q8TDZ2 1067 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 NSMCE1Q8WV22 266 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 DDX12PQ92771 950 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 SYN2Q92777 582 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 AP1M1Q9BXS5 423 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 YIPF3Q9GZM5 350 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 GOLPH3Q9H4A6 298 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 RIC8AQ9NPQ8 531 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 MINPP1Q9UNW1 487 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 TOGARAM1Q9Y4F4 1720 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 SRRM3A6NNA2 597 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 NOL4O94818 638 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 EPS15P42566 896 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 CUL1Q13616 776 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 TLDC1Q6P9B6 456 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 DZIP1Q86YF9 867 aaKnown RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 ARMC2Q8NEN0 867 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 SNX29Q8TEQ0 813 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 LMBR1Q8WVP7 490 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 PNMA5Q96PV4 448 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 TMEM47Q9BQJ4 181 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms