RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 JPH1Q9HDC5 661 aaPredicted RBP15.9■□□□□ 0.14
SEC13-204ENST00000397099 KCNH7Q9NS40 1196 aa15.9■□□□□ 0.14
SEC13-204ENST00000397099 ERAP1Q9NZ08 941 aa15.9■□□□□ 0.14
SEC13-204ENST00000397099 SLC4A7Q9Y6M7 1214 aa15.9■□□□□ 0.14
SEC13-204ENST00000397099 A0A0C4DFX4 3053 aa15.9■□□□□ 0.14
SEC13-204ENST00000397099 EMSYQ7Z589 1322 aa15.9■□□□□ 0.14
SEC13-204ENST00000397099 NRCAMQ92823 1304 aa15.9■□□□□ 0.14
SEC13-204ENST00000397099 SORBS3O60504 671 aa15.89■□□□□ 0.13
SEC13-204ENST00000397099 EFCAB14O75071 495 aa15.89■□□□□ 0.13
SEC13-204ENST00000397099 ARHGAP4P98171 946 aa15.89■□□□□ 0.13
SEC13-204ENST00000397099 SETQ01105 290 aaPredicted RBP15.89■□□□□ 0.13
SEC13-204ENST00000397099 LRRC8DQ7L1W4 858 aa15.89■□□□□ 0.13
SEC13-204ENST00000397099 PHOSPHO2Q8TCD6 241 aa15.89■□□□□ 0.13
SEC13-204ENST00000397099 PHKBQ93100 1093 aa15.89■□□□□ 0.13
SEC13-204ENST00000397099 SMARCAD1Q9H4L7 1026 aa15.89■□□□□ 0.13
SEC13-204ENST00000397099 SLC9A2Q9UBY0 812 aa15.89■□□□□ 0.13
SEC13-204ENST00000397099 TRANK1O15050 2925 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 EYSQ5T1H1 3165 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 ATP9AO75110 1047 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 CKBP12277 381 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 XBP1P17861 261 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 TCF7P36402 384 aaPredicted RBP15.88■□□□□ 0.13
SEC13-204ENST00000397099 CCT2P78371 535 aaKnown RBP15.88■□□□□ 0.13
SEC13-204ENST00000397099 SERINC5Q86VE9 423 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 ATP6V0A1Q93050 837 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 FTOQ9C0B1 505 aaKnown RBP eCLIP15.88■□□□□ 0.13
SEC13-204ENST00000397099 AZI2Q9H6S1 392 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 UNC80Q8N2C7 3258 aa15.88■□□□□ 0.13
SEC13-204ENST00000397099 CDH23Q9H251 3354 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 SMIM10L2AP0DMW4 78 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 SMIM10L2BP0DMW5 78 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 SLC26A2P50443 739 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 JAKMIP3Q5VZ66 844 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 CTAGE1Q96RT6 745 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 SLC9A7Q96T83 725 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 GAS2L1Q99501 681 aaPredicted RBP15.87■□□□□ 0.13
SEC13-204ENST00000397099 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
SEC13-204ENST00000397099 NKX2-4Q9H2Z4 354 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 NCOA5Q9HCD5 579 aaKnown RBP15.87■□□□□ 0.13
SEC13-204ENST00000397099 TBC1D22BQ9NU19 505 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 TCEAL9Q9UHQ7 104 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 SCN5AQ14524 2016 aa15.87■□□□□ 0.13
SEC13-204ENST00000397099 CXCL10P02778 98 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 ATP2A2P16615 1042 aaKnown RBP15.86■□□□□ 0.13
SEC13-204ENST00000397099 USP11P51784 963 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 RABGGTBP53611 331 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 NLRP5P59047 1200 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 UTP14CQ5TAP6 766 aaKnown RBP15.86■□□□□ 0.13
SEC13-204ENST00000397099 TAF2Q6P1X5 1199 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 CRYGNQ8WXF5 182 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 WASF1Q92558 559 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 GLG1Q92896 1179 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 RNPEPQ9H4A4 650 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 PRDM12Q9H4Q4 367 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 BCAS3Q9H6U6 928 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 SLC28A3Q9HAS3 691 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 AGO4Q9HCK5 861 aaKnown RBP15.86■□□□□ 0.13
SEC13-204ENST00000397099 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
SEC13-204ENST00000397099 GSTTP1A0A1W2PQM5 241 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 RRN3P2A6NIE6 340 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 PFKFB2O60825 505 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 LGR5O75473 907 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 CIITAP33076 1130 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 SP4Q02446 784 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 TRIM71Q2Q1W2 868 aaKnown RBP15.85■□□□□ 0.13
SEC13-204ENST00000397099 CNKSR3Q6P9H4 555 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 FAM43BQ6ZT52 329 aaPredicted RBP15.85■□□□□ 0.13
SEC13-204ENST00000397099 PLPPR4Q7Z2D5 763 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 RPAINQ86UA6 219 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 RSPH3Q86UC2 560 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 PLA2G4DQ86XP0 818 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 DHX38Q92620 1227 aaKnown RBP15.85■□□□□ 0.13
SEC13-204ENST00000397099 TMEM260Q9NX78 707 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 PCDHA4Q9UN74 947 aa15.85■□□□□ 0.13
SEC13-204ENST00000397099 YBX2Q9Y2T7 364 aaKnown RBP15.85■□□□□ 0.13
SEC13-204ENST00000397099 CHD7Q9P2D1 2997 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 ABHD14A-ACY1A0A1B0GW23 586 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 RSPH10B2B2RC85 870 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 KIF28PB7ZC32 967 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 IPO5O00410 1097 aaKnown RBP15.84■□□□□ 0.13
SEC13-204ENST00000397099 ATG7O95352 703 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 RSPH10BP0C881 870 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 THPOP40225 353 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 KCNJ6P48051 423 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 ACTR2P61160 394 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 SMAP1Q8IYB5 467 aaPredicted RBP15.84■□□□□ 0.13
SEC13-204ENST00000397099 DAGLBQ8NCG7 672 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 CYP2W1Q8TAV3 490 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 PPM1EQ8WY54 764 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 VWCEQ96DN2 955 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 PGBD1Q96JS3 809 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 ZNF577Q9BSK1 485 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 VPS54Q9P1Q0 977 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 PCDHA11Q9Y5I1 949 aa15.84■□□□□ 0.13
SEC13-204ENST00000397099 IGLV3-22A0A075B6J6 115 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 FAM86B1E9PN63 330 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 TREHO43280 583 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 FAM86B2P0C5J1 330 aa15.83■□□□□ 0.12
SEC13-204ENST00000397099 ARP10275 920 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms