RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 LMBR1Q8WVP7 490 aa18.72■□□□□ 0.59
CLTA-203ENST00000396603 MRPL38Q96DV4 380 aaKnown RBP18.72■□□□□ 0.59
CLTA-203ENST00000396603 ZFP91Q96JP5 570 aaPredicted RBP18.72■□□□□ 0.59
CLTA-203ENST00000396603 NECAB3Q96P71 396 aaPredicted RBP18.72■□□□□ 0.59
CLTA-203ENST00000396603 ERAP1Q9NZ08 941 aa18.72■□□□□ 0.59
CLTA-203ENST00000396603 ARIH1Q9Y4X5 557 aaPredicted RBP18.72■□□□□ 0.59
CLTA-203ENST00000396603 KCNA2P16389 499 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 TCF7P36402 384 aaPredicted RBP18.71■□□□□ 0.59
CLTA-203ENST00000396603 ARHGAP4P98171 946 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 PUS10Q3MIT2 529 aaKnown RBP18.71■□□□□ 0.59
CLTA-203ENST00000396603 LEXMQ3ZCV2 418 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 TIGD5Q53EQ6 642 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 RSPH3Q86UC2 560 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 SGMS1Q86VZ5 419 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 SRBD1Q8N5C6 995 aaKnown RBP18.71■□□□□ 0.59
CLTA-203ENST00000396603 SEPT1Q8WYJ6 367 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 TNPO1Q92973 898 aaKnown RBP18.71■□□□□ 0.59
CLTA-203ENST00000396603 YME1L1Q96TA2 773 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 IFIH1Q9BYX4 1025 aaKnown RBP18.71■□□□□ 0.59
CLTA-203ENST00000396603 LSG1Q9H089 658 aaKnown RBP18.71■□□□□ 0.59
CLTA-203ENST00000396603 UBE2ZQ9H832 354 aaPredicted RBP18.71■□□□□ 0.59
CLTA-203ENST00000396603 EHMT1Q9H9B1 1298 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 MTUS1Q9ULD2 1270 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 SLC12A7Q9Y666 1083 aa18.71■□□□□ 0.59
CLTA-203ENST00000396603 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.7■□□□□ 0.58
CLTA-203ENST00000396603 SPDYE3A6NKU9 549 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 H3BNC9 293 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 CTSHP09668 335 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 EPC2Q52LR7 807 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 FAM117BQ6P1L5 589 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 TRIM50Q86XT4 487 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 PIBF1Q8WXW3 757 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 C17orf80Q9BSJ5 609 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 MYL10Q9BUA6 226 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 RWDD3Q9Y3V2 267 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 UBIAD1Q9Y5Z9 338 aa18.7■□□□□ 0.58
CLTA-203ENST00000396603 BAZ2BQ9UIF8 2168 aaKnown RBP18.69■□□□□ 0.58
CLTA-203ENST00000396603 MBLAC1A4D2B0 266 aaPredicted RBP18.69■□□□□ 0.58
CLTA-203ENST00000396603 PLEKHA8P1O95397 391 aa18.69■□□□□ 0.58
CLTA-203ENST00000396603 ITGB5P18084 799 aa18.69■□□□□ 0.58
CLTA-203ENST00000396603 MTMR1Q13613 665 aa18.69■□□□□ 0.58
CLTA-203ENST00000396603 NECTIN1Q15223 517 aa18.69■□□□□ 0.58
CLTA-203ENST00000396603 UTP14CQ5TAP6 766 aaKnown RBP18.69■□□□□ 0.58
CLTA-203ENST00000396603 TMTC3Q6ZXV5 915 aa18.69■□□□□ 0.58
CLTA-203ENST00000396603 SMARCAD1Q9H4L7 1026 aa18.69■□□□□ 0.58
CLTA-203ENST00000396603 SQORQ9Y6N5 450 aa18.69■□□□□ 0.58
CLTA-203ENST00000396603 RRN3P2A6NIE6 340 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 C5orf67F2Z3F1 127 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 hCG_1984214I3L0E3 225 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 SLC27A2O14975 620 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 RB1P06400 928 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 PPFIA1Q13136 1202 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 COL19A1Q14993 1142 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 PPP1R18Q6NYC8 613 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 ZNF713Q8N859 430 aaPredicted RBP18.68■□□□□ 0.58
CLTA-203ENST00000396603 FANCBQ8NB91 859 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 ESYT1Q9BSJ8 1104 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 JADE2Q9NQC1 790 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 RBM28Q9NW13 759 aaKnown RBP18.68■□□□□ 0.58
CLTA-203ENST00000396603 TUBE1Q9UJT0 475 aa18.68■□□□□ 0.58
CLTA-203ENST00000396603 GSTTP1A0A1W2PQM5 241 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 NCK2O43639 380 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 ATP9AO75110 1047 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 MGAT3Q09327 533 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 RNF20Q5VTR2 975 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 CREB3L3Q68CJ9 461 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 TMEM192Q8IY95 271 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 IL17RAQ96F46 866 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 LMAN2LQ9H0V9 348 aa18.67■□□□□ 0.58
CLTA-203ENST00000396603 FOSP01100 380 aaPredicted RBP18.66■□□□□ 0.58
CLTA-203ENST00000396603 CHRNA1P02708 482 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 SP4Q02446 784 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 GRIK4Q16099 956 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 SYNE3Q6ZMZ3 975 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 FIBCD1Q8N539 461 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 NEK9Q8TD19 979 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 GLG1Q92896 1179 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 GLT8D2Q9H1C3 349 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 RC3H2Q9HBD1 1191 aaKnown RBP18.66■□□□□ 0.58
CLTA-203ENST00000396603 JPH1Q9HDC5 661 aaPredicted RBP18.66■□□□□ 0.58
CLTA-203ENST00000396603 PCDHA6Q9UN73 950 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 PCDHA8Q9Y5H6 950 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 NFASCO94856 1347 aa18.66■□□□□ 0.58
CLTA-203ENST00000396603 TCF20Q9UGU0 1960 aaKnown RBP18.66■□□□□ 0.58
CLTA-203ENST00000396603 RALGAPA2Q2PPJ7 1873 aa18.65■□□□□ 0.58
CLTA-203ENST00000396603 CDC45O75419 566 aa18.65■□□□□ 0.58
CLTA-203ENST00000396603 RCAN1P53805 252 aa18.65■□□□□ 0.58
CLTA-203ENST00000396603 GPM6BQ13491 265 aa18.65■□□□□ 0.58
CLTA-203ENST00000396603 TSHZ1Q6ZSZ6 1077 aa18.65■□□□□ 0.58
CLTA-203ENST00000396603 BANK1Q8NDB2 785 aa18.65■□□□□ 0.58
CLTA-203ENST00000396603 CLP1Q92989 425 aaKnown RBP18.65■□□□□ 0.58
CLTA-203ENST00000396603 FTHL17Q9BXU8 183 aa18.65■□□□□ 0.58
CLTA-203ENST00000396603 NSUN3Q9H649 340 aaKnown RBP18.65■□□□□ 0.58
CLTA-203ENST00000396603 FAM50BQ9Y247 325 aa18.65■□□□□ 0.58
CLTA-203ENST00000396603 GPR37L1O60883 481 aa18.64■□□□□ 0.57
CLTA-203ENST00000396603 UPP2O95045 317 aa18.64■□□□□ 0.57
CLTA-203ENST00000396603 KCNA5P22460 613 aa18.64■□□□□ 0.57
CLTA-203ENST00000396603 SLC26A2P50443 739 aa18.64■□□□□ 0.57
CLTA-203ENST00000396603 LPIN1Q14693 890 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms