RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 PTPRSQ13332 1948 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 DCXO43602 365 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 GPM6BQ13491 265 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 WTAPQ15007 396 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 TCTN1Q2MV58 587 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 CATIPQ7Z7H3 387 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 HOMER1Q86YM7 354 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 TMEM192Q8IY95 271 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 TMTC2Q8N394 836 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 PLCD3Q8N3E9 789 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 PPP1R13LQ8WUF5 828 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 CLP1Q92989 425 aaKnown RBP8.06□□□□□ -1.12
XCR1-202ENST00000395946 P2RX5Q93086 422 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 IL17RAQ96F46 866 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 FTHL17Q9BXU8 183 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 RNPEPQ9H4A4 650 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 C11orf16Q9NQ32 467 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 ERAP1Q9NZ08 941 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 SEC63Q9UGP8 760 aaKnown RBP8.06□□□□□ -1.12
XCR1-202ENST00000395946 MTUS1Q9ULD2 1270 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 TET1Q8NFU7 2136 aa8.06□□□□□ -1.12
XCR1-202ENST00000395946 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 MBLAC1A4D2B0 266 aaPredicted RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 IFIT3O14879 490 aaKnown RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 TREHO43280 583 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 CYTH3O43739 400 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 CALM1P0DP23 149 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 CALM2P0DP24 149 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 CALM3P0DP25 149 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 HOXA13P31271 388 aaPredicted RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 MRPS9P82933 396 aaKnown RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 ZNF200P98182 395 aaPredicted RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 SP2Q02086 613 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 HIC1Q14526 733 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 PKN1Q16512 942 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 CSPP1Q1MSJ5 1256 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 SPRED2Q7Z698 418 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 TMCO2Q7Z6W1 182 aaPredicted RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 FCHSD1Q86WN1 690 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 ADHFE1Q8IWW8 467 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 FIBCD1Q8N539 461 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 IL31RAQ8NI17 732 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 CTCFLQ8NI51 663 aaPredicted RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 SMARCC2Q8TAQ2 1214 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 LMBR1Q8WVP7 490 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 RRP36Q96EU6 259 aaKnown RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 PIGSQ96S52 555 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 RC3H2Q9HBD1 1191 aaKnown RBP8.05□□□□□ -1.12
XCR1-202ENST00000395946 MICAL3Q7RTP6 2002 aa8.05□□□□□ -1.12
XCR1-202ENST00000395946 RALGAPA2Q2PPJ7 1873 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 POTEB3A0JP26 581 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 RRN3P2A6NIE6 340 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 C19orf67A6NJJ6 358 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 MMP1P03956 469 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 CYP21A2P08686 494 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 IL9P15248 144 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 CTNNB1P35222 781 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 BMPR1AP36894 532 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 SLC26A2P50443 739 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 ARHGAP4P98171 946 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 ZP2Q05996 745 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 MGAT3Q09327 533 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 SMAD2Q15796 467 aaKnown RBP8.04□□□□□ -1.12
XCR1-202ENST00000395946 TCEAL5Q5H9L2 206 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 IER5Q5VY09 327 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 FAM117BQ6P1L5 589 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 POTEBQ6S5H4 581 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 TSHZ1Q6ZSZ6 1077 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 CYB5R4Q7L1T6 521 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 CYFIP1Q7L576 1253 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 CMTR2Q8IYT2 770 aaKnown RBP8.04□□□□□ -1.12
XCR1-202ENST00000395946 SEPT1Q8WYJ6 367 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 ZNF689Q96CS4 500 aaPredicted RBP8.04□□□□□ -1.12
XCR1-202ENST00000395946 PRRX2Q99811 253 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 SMARCAD1Q9H4L7 1026 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 SETD4Q9NVD3 440 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 RAPGEFL1Q9UHV5 662 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 TUBE1Q9UJT0 475 aa8.04□□□□□ -1.12
XCR1-202ENST00000395946 hCG_1984214I3L0E3 225 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 M0QZ92 97 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 MEIS2O14770 477 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 CTSHP09668 335 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 STAG3L1P0CL83 205 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 TCF7P36402 384 aaPredicted RBP8.03□□□□□ -1.12
XCR1-202ENST00000395946 PPFIA1Q13136 1202 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 SMAD4Q13485 552 aaKnown RBP8.03□□□□□ -1.12
XCR1-202ENST00000395946 MTMR1Q13613 665 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 ODR4Q5SWX8 454 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 TTC22Q5TAA0 569 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 B4GALNT3Q6L9W6 998 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 NPAS4Q8IUM7 802 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 ZNF713Q8N859 430 aaPredicted RBP8.03□□□□□ -1.12
XCR1-202ENST00000395946 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
XCR1-202ENST00000395946 TMEM87BQ96K49 555 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 MFSD14AQ96MC6 490 aa8.03□□□□□ -1.12
XCR1-202ENST00000395946 CD320Q9NPF0 282 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms