RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ARNTL2Q8WYA1 636 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 JADE2Q9NQC1 790 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 THEGQ9P2T0 379 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 ZNF215Q9UL58 517 aaPredicted RBP20.68■□□□□ 0.9
CXCL12-204ENST00000395793 MTCH2Q9Y6C9 303 aa20.68■□□□□ 0.9
CXCL12-204ENST00000395793 KIF28PB7ZC32 967 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 STXBP3O00186 592 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 GJB5O95377 273 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 NAPAP54920 295 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 MTMR1Q13613 665 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 IKBKEQ14164 716 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 PLEKHG4Q58EX7 1191 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 TJAP1Q5JTD0 557 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 GIMAP8Q8ND71 665 aaPredicted RBP20.67■□□□□ 0.9
CXCL12-204ENST00000395793 CYP2W1Q8TAV3 490 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 RIC8AQ9NPQ8 531 aa20.67■□□□□ 0.9
CXCL12-204ENST00000395793 V9GY48 417 aaPredicted RBP20.67■□□□□ 0.9
CXCL12-204ENST00000395793 LPXNO60711 386 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 POU3F3P20264 500 aaPredicted RBP20.66■□□□□ 0.9
CXCL12-204ENST00000395793 ARHGAP4P98171 946 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 KRT32Q14532 448 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 PPP1R18Q6NYC8 613 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 FAM117BQ6P1L5 589 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 CDHR1Q96JP9 859 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 PCYT2Q99447 389 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 TMEM260Q9NX78 707 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 SNX14Q9Y5W7 946 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 EMSYQ7Z589 1322 aa20.66■□□□□ 0.9
CXCL12-204ENST00000395793 ADAMTS3O15072 1205 aa20.65■□□□□ 0.9
CXCL12-204ENST00000395793 APOBRQ0VD83 1088 aa20.65■□□□□ 0.9
CXCL12-204ENST00000395793 GRB10Q13322 594 aa20.65■□□□□ 0.9
CXCL12-204ENST00000395793 RUFY4Q6ZNE9 571 aa20.65■□□□□ 0.9
CXCL12-204ENST00000395793 MXRA8Q9BRK3 442 aa20.65■□□□□ 0.9
CXCL12-204ENST00000395793 ZBED2Q9BTP6 218 aa20.65■□□□□ 0.9
CXCL12-204ENST00000395793 ANO3Q9BYT9 981 aa20.65■□□□□ 0.9
CXCL12-204ENST00000395793 EFCAB14O75071 495 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 CAND2O75155 1236 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 MARK3P27448 753 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 HSPA4P34932 840 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 ADD1P35611 737 aaKnown RBP20.64■□□□□ 0.89
CXCL12-204ENST00000395793 CLK2P49760 499 aaKnown RBP20.64■□□□□ 0.89
CXCL12-204ENST00000395793 ADCY7P51828 1080 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 FAM26DQ5JW98 314 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 Q6ZUG5 572 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 ATXN2LQ8WWM7 1075 aaKnown RBP20.64■□□□□ 0.89
CXCL12-204ENST00000395793 SEPT1Q8WYJ6 367 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 KCNH7Q9NS40 1196 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 BARHL2Q9NY43 387 aa20.64■□□□□ 0.89
CXCL12-204ENST00000395793 NID2Q14112 1375 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 NRCAMQ92823 1304 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 LINC01553A4QN01 128 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 ARP10275 920 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 GNAT1P11488 350 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 RCAN1P53805 252 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 GDPD5Q8WTR4 605 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 JAKMIP1Q96N16 626 aaKnown RBP20.63■□□□□ 0.89
CXCL12-204ENST00000395793 ASB2Q96Q27 587 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 RAD9AQ99638 391 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 NAP1L2Q9ULW6 460 aaPredicted RBP20.63■□□□□ 0.89
CXCL12-204ENST00000395793 TCF20Q9UGU0 1960 aaKnown RBP20.63■□□□□ 0.89
CXCL12-204ENST00000395793 LOXHD1Q8IVV2 1947 aa20.63■□□□□ 0.89
CXCL12-204ENST00000395793 NLRC5Q86WI3 1866 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 SMCO2A6NFE2 343 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 hCG_1984214I3L0E3 225 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 CHRNA1P02708 482 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 HMGB1P09429 215 aaKnown RBP20.62■□□□□ 0.89
CXCL12-204ENST00000395793 PPFIA1Q13136 1202 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 ITGB3BPQ13352 177 aaPredicted RBP20.62■□□□□ 0.89
CXCL12-204ENST00000395793 GRIK4Q16099 956 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 MARCH8Q5T0T0 291 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 MYOCDQ8IZQ8 938 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 ZNF713Q8N859 430 aaPredicted RBP20.62■□□□□ 0.89
CXCL12-204ENST00000395793 SYMPKQ92797 1274 aaKnown RBP20.62■□□□□ 0.89
CXCL12-204ENST00000395793 BRF1Q92994 677 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 ZBTB10Q96DT7 871 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 EHMT1Q9H9B1 1298 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 JPH1Q9HDC5 661 aaPredicted RBP20.62■□□□□ 0.89
CXCL12-204ENST00000395793 MTUS1Q9ULD2 1270 aa20.62■□□□□ 0.89
CXCL12-204ENST00000395793 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.61■□□□□ 0.89
CXCL12-204ENST00000395793 MAFGO15525 162 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 SREBF1P36956 1147 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 METAP2P50579 478 aaKnown RBP eCLIP20.61■□□□□ 0.89
CXCL12-204ENST00000395793 ERVK-21P61565 698 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 TFF2Q03403 129 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 MGAT3Q09327 533 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 SEPT8Q92599 483 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 AGXT2Q9BYV1 514 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 ERAP1Q9NZ08 941 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 SLC9A2Q9UBY0 812 aa20.61■□□□□ 0.89
CXCL12-204ENST00000395793 NFASCO94856 1347 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 MBLAC1A4D2B0 266 aaPredicted RBP20.6■□□□□ 0.89
CXCL12-204ENST00000395793 GTPBP6O43824 516 aaPredicted RBP20.6■□□□□ 0.89
CXCL12-204ENST00000395793 FOSP01100 380 aaPredicted RBP20.6■□□□□ 0.89
CXCL12-204ENST00000395793 AMHP03971 560 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 MRPS5P82675 430 aaKnown RBP20.6■□□□□ 0.89
CXCL12-204ENST00000395793 HTRA4P83105 476 aaPredicted RBP20.6■□□□□ 0.89
CXCL12-204ENST00000395793 AP3B2Q13367 1082 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 PKN1Q16512 942 aa20.6■□□□□ 0.89
CXCL12-204ENST00000395793 PFKFB3Q16875 520 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms