RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SNAP25P60880 206 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 PPIL2Q13356 520 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 C4orf17Q53FE4 359 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 NOM1Q5C9Z4 860 aaKnown RBP12.99□□□□□ -0.33
RTN1-203ENST00000395090 C16orf46Q6P387 395 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 CATSPERGQ6ZRH7 1159 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 PRRT2Q7Z6L0 340 aaPredicted RBP12.99□□□□□ -0.33
RTN1-203ENST00000395090 SLC38A10Q9HBR0 1119 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 TMOD4Q9NZQ9 345 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 OTOFQ9HC10 1997 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 MYH15Q9Y2K3 1946 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 ZNF536O15090 1300 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 CEBPZQ03701 1054 aaKnown RBP12.99□□□□□ -0.33
RTN1-203ENST00000395090 COG2Q14746 738 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 SF3A1Q15459 793 aaKnown RBP12.99□□□□□ -0.33
RTN1-203ENST00000395090 KLHL40Q2TBA0 621 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 PIK3AP1Q6ZUJ8 805 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 LYSMD3Q7Z3D4 306 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 KRT25Q7Z3Z0 450 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 REXO1Q8N1G1 1221 aaKnown RBP12.99□□□□□ -0.33
RTN1-203ENST00000395090 KCNG4Q8TDN1 519 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 CUL5Q93034 780 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 PGBD1Q96JS3 809 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 TANGO6Q9C0B7 1094 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
RTN1-203ENST00000395090 MYPNQ86TC9 1320 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 CCDC194A0A1B0GVG4 234 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 H3BRB1 525 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 OPLAHO14841 1288 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 PPP6R2O75170 966 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 FLOT1O75955 427 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 ICAM1P05362 532 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 HOXA7P31268 230 aaPredicted RBP12.98□□□□□ -0.33
RTN1-203ENST00000395090 PLA2G4AP47712 749 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 PRICKLE2Q7Z3G6 844 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 C2orf69Q8N8R5 385 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 RASGRP4Q8TDF6 673 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 HELQQ8TDG4 1101 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
RTN1-203ENST00000395090 ZFP42Q96MM3 310 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 TUT1Q9H6E5 874 aaKnown RBP12.98□□□□□ -0.33
RTN1-203ENST00000395090 GBA2Q9HCG7 927 aaPredicted RBP12.98□□□□□ -0.33
RTN1-203ENST00000395090 HOXC10Q9NYD6 342 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 NOL7Q9UMY1 257 aaKnown RBP12.98□□□□□ -0.33
RTN1-203ENST00000395090 HCN4Q9Y3Q4 1203 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 PCDHB6Q9Y5E3 794 aa12.98□□□□□ -0.33
RTN1-203ENST00000395090 VWA5AO00534 786 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 MEIS2O14770 477 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 SPTLC2O15270 562 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 ICMTO60725 284 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 MBD3O95983 291 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 STK38Q15208 465 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 CST9Q5W186 159 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 ADALQ6DHV7 355 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 MCTP2Q6DN12 878 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 OPTNQ96CV9 577 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 SAP130Q9H0E3 1048 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 BIN2Q9UBW5 565 aaPredicted RBP12.97□□□□□ -0.33
RTN1-203ENST00000395090 PCDHA7Q9UN72 937 aa12.97□□□□□ -0.33
RTN1-203ENST00000395090 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
RTN1-203ENST00000395090 ABCB11O95342 1321 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 ATP2A1O14983 1001 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 CELF2O95319 508 aaKnown RBP12.96□□□□□ -0.33
RTN1-203ENST00000395090 BMP15O95972 392 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 POU4F2Q12837 409 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 MOGSQ13724 837 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
RTN1-203ENST00000395090 GLYCTKQ8IVS8 523 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 ALDH16A1Q8IZ83 802 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 ZNF408Q9H9D4 720 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 CEP131Q9UPN4 1083 aa12.96□□□□□ -0.33
RTN1-203ENST00000395090 MRPL11Q9Y3B7 192 aaKnown RBP12.96□□□□□ -0.33
RTN1-203ENST00000395090 RLFQ13129 1914 aa12.96□□□□□ -0.34
RTN1-203ENST00000395090 A0A1W2PQ27 194 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 A0A1W2PQ64 194 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 A0A1W2PQD8 194 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 EDIL3O43854 480 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 ZBED4O75132 1171 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 ME1P48163 572 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 OAZ1P54368 228 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 GHRHRQ02643 423 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 MTMR3Q13615 1198 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 INF2Q27J81 1249 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 USH1GQ495M9 461 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 TTC38Q5R3I4 469 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 AXDND1Q5T1B0 1012 aaPredicted RBP12.95□□□□□ -0.34
RTN1-203ENST00000395090 TREML2Q5T2D2 321 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 JAKMIP3Q5VZ66 844 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 USP17L6PQ6QN14 398 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
RTN1-203ENST00000395090 JMYQ8N9B5 988 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 ATG4CQ96DT6 458 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 TMEM260Q9NX78 707 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 ST8SIA5O15466 376 aa12.95□□□□□ -0.34
RTN1-203ENST00000395090 FOSP01100 380 aaPredicted RBP12.95□□□□□ -0.34
RTN1-203ENST00000395090 PHKA2P46019 1235 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms