RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 XPNPEP3Q9NQH7 507 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 RCOR1Q9UKL0 485 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SAMM50Q9Y512 469 aa13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 SRPRBQ9Y5M8 271 aaKnown RBP13.65□□□□□ -0.22
GTF2IRD2B-201ENST00000394939 ELP1O95163 1332 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 TCHHQ07283 1943 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 VWA3AA6NCI4 1184 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 CHMP2AO43633 222 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 CAPN2P17655 700 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 MARCKSP29966 332 aaPredicted RBP13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 LONP1P36776 959 aaKnown RBP13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 TECP42680 631 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ME1P48163 572 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 GJA9P57773 515 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SP4Q02446 784 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 MIER3Q7Z3K6 550 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 RNF180Q86T96 592 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 LEO1Q8WVC0 666 aaPredicted RBP13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SEPT1Q8WYJ6 367 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 COPS5Q92905 334 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 AK8Q96MA6 479 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 UPF3AQ9H1J1 476 aaKnown RBP13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 PAK6Q9NQU5 681 aaPredicted RBP13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 PCDH10Q9P2E7 1040 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 LRWD1Q9UFC0 647 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 VAV3Q9UKW4 847 aa13.64□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ADCY6O43306 1168 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SORBS3O60504 671 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 KPNA6O60684 536 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 PSAPP07602 524 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 C6orf222P0C671 652 aaPredicted RBP13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 TXLNAP40222 546 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ACTR2P61160 394 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 FSCN1Q16658 493 aaKnown RBP13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 DGKDQ16760 1214 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 GJC2Q5T442 439 aaPredicted RBP13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 FAM160B1Q5W0V3 765 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 HAUS3Q68CZ6 603 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 NCAPH2Q6IBW4 605 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ARRDC4Q8NCT1 418 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 NEK9Q8TD19 979 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 AFG1LQ8WV93 481 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 GJA10Q969M2 543 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 TMEM106CQ9BVX2 250 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 UNC45AQ9H3U1 944 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 AZI2Q9H6S1 392 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 DISC1Q9NRI5 854 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 PCDHA10Q9Y5I2 948 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 DOCK5Q9H7D0 1870 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 A6NJR5 290 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 GOLGA6L22H0YM25 854 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 BACH1O14867 736 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 DKC1O60832 514 aaKnown RBP eCLIP13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 CUTAO60888 179 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 EPHA7Q15375 998 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 MTFR1Q15390 333 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 HSDL1Q3SXM5 330 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 GNASQ5JWF2 1037 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 KRT79Q5XKE5 535 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 IGSF22Q8N9C0 903 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 DEFB118Q96PH6 123 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 GPR20Q99678 358 aa13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 FBXO2Q9UK22 296 aaPredicted RBP13.62□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 POTEMA6NI47 508 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SLC26A4O43511 780 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 CCNE2O96020 404 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 PGK1P00558 417 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 GJB1P08034 283 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 MMP3P08254 477 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SUPT20HL2P0C7V6 817 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 CST5P28325 142 aaPredicted RBP13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 TCF7P36402 384 aaPredicted RBP13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 UBA7P41226 1012 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 NKX3-2P78367 333 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 TMEM63BQ5T3F8 832 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 B3GNT9Q6UX72 402 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ABHD15Q6UXT9 468 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 RASSF8Q8NHQ8 419 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ATP6V0A1Q93050 837 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SMARCAD1Q9H4L7 1026 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 BCAS3Q9H6U6 928 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ZNF215Q9UL58 517 aaPredicted RBP13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 KDM3AQ9Y4C1 1321 aa13.61□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 KBTBD13C9JR72 458 aa13.6□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ADAMTS4O75173 837 aa13.6□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 ATG7O95352 703 aa13.6□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 P4HBP07237 508 aaKnown RBP13.6□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 HOXD8P13378 290 aaPredicted RBP13.6□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 SLC26A2P50443 739 aa13.6□□□□□ -0.23
GTF2IRD2B-201ENST00000394939 IL17AQ16552 155 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms