RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ZNF646O15015 1829 aaPredicted RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 BRCA1P38398 1863 aaKnown RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 F8W031 263 aaPredicted RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 TRAF5O00463 557 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 SERPING1P05155 500 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 NAP1L1P55209 391 aaKnown RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 CFAP221Q4G0U5 840 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 CCDC40Q4G0X9 1142 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 GLE1Q53GS7 698 aaKnown RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 FAM83BQ5T0W9 1011 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 SYN2Q92777 582 aaPredicted RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 LSM14BQ9BX40 385 aaKnown RBP20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 FGFBP2Q9BYJ0 223 aa20.22■□□□□ 0.83
PCDHA1-202ENST00000394633 TNNI2P48788 182 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 GBP6Q6ZN66 633 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 HSF2BPO75031 334 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 PALMO75781 387 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 GLI1P08151 1106 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 CCT5P48643 541 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 GNGT1P63211 74 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 UBE2SQ16763 222 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 PACS2Q86VP3 889 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 LRRC47Q8N1G4 583 aaKnown RBP20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 HAS1Q92839 578 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 GJA10Q969M2 543 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 ZIM3Q96PE6 472 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 GDF3Q9NR23 364 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 PANK4Q9NVE7 773 aa20.21■□□□□ 0.83
PCDHA1-202ENST00000394633 COL4A5P29400 1685 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 G3V3G9 751 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 EIF3HO15372 352 aaKnown RBP eCLIP20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 ECE2O60344 883 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 PLCG2P16885 1265 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 PTGER2P43116 358 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 POLR2FP61218 127 aaKnown RBP20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 APBA1Q02410 837 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 NNTQ13423 1086 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 ASPRV1Q53RT3 343 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 DCAF8Q5TAQ9 597 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 PPP4R3AQ6IN85 833 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 TBC1D22AQ8WUA7 517 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 NUCKS1Q9H1E3 243 aaKnown RBP20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 MTMR4Q9NYA4 1195 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 RNF14Q9UBS8 474 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 PLIN4Q96Q06 1357 aa20.2■□□□□ 0.82
PCDHA1-202ENST00000394633 NOP2P46087 812 aaKnown RBP20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 CARSP49589 748 aaKnown RBP20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 NAB2Q15742 525 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 GPCPD1Q9NPB8 672 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 TBC1D7Q9P0N9 293 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 ZSCAN5CA6NGD5 496 aaPredicted RBP20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 FTCDO95954 541 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 KLRC1P26715 233 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 SEPT2Q15019 361 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 IFT20Q8IY31 132 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 PPM1EQ8WY54 764 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 CEP63Q96MT8 703 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 RUFY1Q96T51 708 aa20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 DDX25Q9UHL0 483 aaKnown RBP20.19■□□□□ 0.82
PCDHA1-202ENST00000394633 PPP1R11O60927 126 aaPredicted RBP20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 FAM153BP0C7A2 387 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 SNHG28P0DPA3 235 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 CLK2P49760 499 aaKnown RBP20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 SKOR1P84550 965 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 FAM153CQ494X1 144 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 TTC31Q49AM3 519 aaPredicted RBP20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 PODNQ7Z5L7 613 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 CLEC10AQ8IUN9 316 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 TRIM59Q8IWR1 403 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 EFCAB13Q8IY85 973 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 TBC1D5Q92609 795 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 RABEP2Q9H5N1 569 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 KANSL2Q9H9L4 492 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 FAM153AQ9UHL3 310 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 HEXIM1O94992 359 aaKnown RBP20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 DNA2P51530 1060 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 SLC18A3Q16572 532 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 TTC19Q6DKK2 380 aaPredicted RBP20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 NELFCDQ8IXH7 590 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 BCAS4Q8TDM0 211 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 JMJD4Q9H9V9 463 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 EFCC1Q9HA90 598 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 NFU1Q9UMS0 254 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 PCDHA2Q9Y5H9 948 aa20.18■□□□□ 0.82
PCDHA1-202ENST00000394633 A0A087X0T9 212 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 ESYT3A0FGR9 886 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 PPIP5K2O43314 1243 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 SSBP05455 408 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 FAM228BP0C875 321 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 EIF6P56537 245 aaKnown RBP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 TGFB2P61812 414 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 MEI1Q5TIA1 1274 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 CC2D2BQ6DHV5 1058 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 FAM163AQ96GL9 167 aaPredicted RBP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 EPB41L5Q9HCM4 733 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 ZNF277Q9NRM2 450 aaPredicted RBP20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 PCDHGC5Q9Y5F6 944 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 GAKO14976 1311 aa20.17■□□□□ 0.82
PCDHA1-202ENST00000394633 YDJCA8MPS7 323 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms