RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 USP17L11C9JVI0 530 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L18D6R9N7 530 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L22D6RA61 530 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L17D6RBQ6 530 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L19D6RCP7 530 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L20D6RJB6 530 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L24Q0WX57 530 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 TMEM266Q2M3C6 531 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP17L6PQ6QN14 398 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 CCDC47Q96A33 483 aaKnown RBP17.12■□□□□ 0.33
PTBP1-204ENST00000394601 SALL4Q9UJQ4 1053 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 FAM170AA1A519 330 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 DDTLA6NHG4 134 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-204ENST00000394601 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
PTBP1-204ENST00000394601 ARSHQ5FYA8 562 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 DPY19L2P1Q6NXN4 242 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 KIAA1328Q86T90 577 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 ZDHHC15Q96MV8 337 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 PSTPIP2Q9H939 334 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 SAR1BQ9Y6B6 198 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 SLX4Q8IY92 1834 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 PPP1R12BO60237 982 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-204ENST00000394601 CYLC1P35663 651 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-204ENST00000394601 USP14P54578 494 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 IFT88Q13099 833 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 KRT79Q5XKE5 535 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 SMCR8Q8TEV9 937 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-204ENST00000394601 LENG9Q96B70 501 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 MED4Q9NPJ6 270 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 CAPN6Q9Y6Q1 641 aa17.12■□□□□ 0.33
PTBP1-204ENST00000394601 CDC25CP30307 473 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 CDR1P51861 262 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 SEC24CP53992 1094 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 IQCDQ96DY2 449 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 SELENOOQ9BVL4 669 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTBP1-204ENST00000394601 LRRC53A6NM62 1247 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 FAM196BA6NMK8 535 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 CRKP46108 304 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 JAG1P78504 1218 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 NAIF1Q69YI7 327 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-204ENST00000394601 TATDN1Q6P1N9 297 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 ZNF572Q7Z3I7 529 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-204ENST00000394601 CREG2Q8IUH2 290 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 TBC1D31Q96DN5 1066 aa17.11■□□□□ 0.33
PTBP1-204ENST00000394601 ZC3H12CQ9C0D7 883 aaKnown RBP17.11■□□□□ 0.33
PTBP1-204ENST00000394601 FAM207AQ9NSI2 230 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-204ENST00000394601 NPHP3-ACAD11A0A0J9YXS1 232 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 ANO9A1A5B4 782 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 E9PMD0 336 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 KRT86O43790 486 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 TLR2O60603 784 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 TRIM37O94972 964 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 NPR1P16066 1061 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 BRD2P25440 801 aaKnown RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 MARSP56192 900 aaKnown RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 LRCH2Q5VUJ6 765 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 SH2D4AQ9H788 454 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 DONSONQ9NYP3 566 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 TRPC5Q9UL62 973 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 KIF13BQ9NQT8 1826 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 GCFC2P16383 781 aaKnown RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 HOXA7P31268 230 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 CACNB3P54284 484 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 SLC12A3P55017 1021 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 NAP1L1P55209 391 aaKnown RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 AKT1S1Q96B36 256 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 PPANQ9NQ55 473 aaKnown RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 BCCIPQ9P287 314 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 PCDHA13Q9Y5I0 950 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 OPLAHO14841 1288 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 APBA1Q02410 837 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 BIRC2Q13490 618 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 COL23A1Q86Y22 540 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-204ENST00000394601 SCFD1Q8WVM8 642 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 TEKT1Q969V4 418 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 RAB34Q9BZG1 259 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 EHD2Q9NZN4 543 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
PTBP1-204ENST00000394601 PJA2O43164 708 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 MED24O75448 989 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 KIF11P52732 1056 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 MRPL12P52815 198 aaKnown RBP17.09■□□□□ 0.33
PTBP1-204ENST00000394601 GUCY1A3Q02108 690 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 SEPT2Q15019 361 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 C2CD5Q86YS7 1000 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 IFT81Q8WYA0 676 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 CABS1Q96KC9 395 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 KRT14P02533 472 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 CYP11B2P19099 503 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 HOXD13P35453 343 aa17.09■□□□□ 0.33
PTBP1-204ENST00000394601 EIF4A3P38919 411 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms