RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 CALCRLQ16602 461 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 RPAINQ86UA6 219 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 SNX29Q8TEQ0 813 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 HVCN1Q96D96 273 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 LRP5O75197 1615 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 DHX9Q08211 1270 aaKnown RBP17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 COBLL1Q53SF7 1204 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 GJA10Q969M2 543 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 CELF4Q9BZC1 486 aaKnown RBP17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 EDEM3Q9BZQ6 932 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 ZMYND12Q9H0C1 365 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 CACNA1SQ13698 1873 aa17.98■□□□□ 0.47
EFEMP1-202ENST00000394555 KIF1CO43896 1103 aaKnown RBP17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 MYBP10242 640 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 ACTN1P12814 892 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 BIRC3Q13489 604 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 C3orf67Q6ZVT6 689 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 ZNF444Q8N0Y2 327 aaPredicted RBP17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 NUCKS1Q9H1E3 243 aaKnown RBP17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 TMEM59LQ9UK28 342 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 PPP1R12BO60237 982 aaPredicted RBP17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 BYSLQ13895 437 aaKnown RBP17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 WLSQ5T9L3 541 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 CADPS2Q86UW7 1296 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 TMEM47Q9BQJ4 181 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 FGFBP2Q9BYJ0 223 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 BAIAP2L1Q9UHR4 511 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 NOC2LQ9Y3T9 749 aaKnown RBP17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 TOGARAM1Q9Y4F4 1720 aa17.97■□□□□ 0.47
EFEMP1-202ENST00000394555 TTI1O43156 1089 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 C21orf2O43822 256 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 PTK2Q05397 1052 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 UBE4AQ14139 1066 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 PPP1R7Q15435 360 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 MSL1Q68DK7 614 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 ATP8A1Q9Y2Q0 1164 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 ABCB11O95342 1321 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 SMIM23A6NLE4 172 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 CLSTN1O94985 981 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 TDP2O95551 362 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 CLNS1AP54105 237 aaKnown RBP17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 HIBCHQ6NVY1 386 aaPredicted RBP17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 METTL13Q8N6R0 699 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 SCFD2Q8WU76 684 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 RAD54LQ92698 747 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 MIEF2Q96C03 454 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 ZHX3Q9H4I2 956 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 MYH1P12882 1939 aa17.96■□□□□ 0.47
EFEMP1-202ENST00000394555 SRRM3A6NNA2 597 aaPredicted RBP17.96■□□□□ 0.46
EFEMP1-202ENST00000394555 PGRMC1O00264 195 aaKnown RBP17.96■□□□□ 0.46
EFEMP1-202ENST00000394555 SLC37A4O43826 429 aa17.96■□□□□ 0.46
EFEMP1-202ENST00000394555 GNA11P29992 359 aa17.96■□□□□ 0.46
EFEMP1-202ENST00000394555 TATDN2Q93075 761 aa17.96■□□□□ 0.46
EFEMP1-202ENST00000394555 RIC8AQ9NPQ8 531 aa17.96■□□□□ 0.46
EFEMP1-202ENST00000394555 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.46
EFEMP1-202ENST00000394555 CTNND1O60716 968 aaKnown RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 NTSR2O95665 410 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 USP11P51784 963 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 TMEM266Q2M3C6 531 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 KRT79Q5XKE5 535 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 ADAT2Q7Z6V5 191 aaKnown RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 REXO1Q8N1G1 1221 aaKnown RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 SYN2Q92777 582 aaPredicted RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 SPAG5Q96R06 1193 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 UBA5Q9GZZ9 404 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 GOPCQ9HD26 462 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 STK17AQ9UEE5 414 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 SEC63Q9UGP8 760 aaKnown RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 SAP30BPQ9UHR5 308 aaKnown RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 CASZ1Q86V15 1759 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 TLDC2A0PJX2 215 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 COASYQ13057 564 aa17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 DZIP1Q86YF9 867 aaKnown RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 TACO1Q9BSH4 297 aaKnown RBP17.95■□□□□ 0.46
EFEMP1-202ENST00000394555 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 PALM3A6NDB9 673 aaPredicted RBP17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 GBP2P32456 591 aaPredicted RBP17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 SBK1Q52WX2 424 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 PEX26Q7Z412 305 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 CCDC50Q8IVM0 306 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 PIGSQ96S52 555 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 PSMD1Q99460 953 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 SELENOSQ9BQE4 189 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 PANK4Q9NVE7 773 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 PNMA2Q9UL42 364 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 MARCH6O60337 910 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 C12orf60Q5U649 245 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 ZNF571Q7Z3V5 609 aaPredicted RBP17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 PBKQ96KB5 322 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 DLEC1Q9Y238 1755 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 COL4A1P02462 1669 aa17.94■□□□□ 0.46
EFEMP1-202ENST00000394555 PAX7P23759 505 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 MTMR3Q13615 1198 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 ECM1Q16610 540 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 FAM26FQ5R3K3 315 aa17.93■□□□□ 0.46
EFEMP1-202ENST00000394555 TMC3Q7Z5M5 1100 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms