RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 NECAB1Q8N987 351 aa12.73□□□□□ -0.37
VTI1BP2-201ENST00000394154 GMCL1P1Q8NEA9 526 aa12.73□□□□□ -0.37
VTI1BP2-201ENST00000394154 MSLNLQ96KJ4 702 aa12.73□□□□□ -0.37
VTI1BP2-201ENST00000394154 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
VTI1BP2-201ENST00000394154 LY9Q9HBG7 655 aa12.73□□□□□ -0.37
VTI1BP2-201ENST00000394154 CLIP2Q9UDT6 1046 aa12.73□□□□□ -0.37
VTI1BP2-201ENST00000394154 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
VTI1BP2-201ENST00000394154 DMXL1Q9Y485 3027 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 DMDP11532 3685 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 C5orf67F2Z3F1 127 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 DHX16O60231 1041 aaKnown RBP12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 RB1P06400 928 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 TSPY3P0CV98 308 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 TSPY8P0CW00 308 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 BMP3P12645 472 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 RASA1P20936 1047 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 ICAM3P32942 547 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 FRMD5Q7Z6J6 570 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 SMRP1Q8NCR6 262 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 GTF3C6Q969F1 213 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 ZKSCAN3Q9BRR0 538 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 C11orf84Q9BUA3 381 aaPredicted RBP12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 IGFLR1Q9H665 355 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 TCP11L1Q9NUJ3 509 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 SLC12A7Q9Y666 1083 aa12.72□□□□□ -0.37
VTI1BP2-201ENST00000394154 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 LINC01565O15544 149 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 ZBTB43O43298 467 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 CTNNB1P35222 781 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 PTK7Q13308 1070 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 ADAM15Q13444 863 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 MBTPS1Q14703 1052 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 PTPN21Q16825 1174 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 IFIT1BQ5T764 474 aaKnown RBP12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 NSMFQ6X4W1 530 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 SCFD2Q8WU76 684 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 CHURC1Q8WUH1 139 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 TOP1MTQ969P6 601 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 PPP2R3CQ969Q6 453 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 MKL1Q969V6 931 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 RIPOR3Q96MK2 946 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 PURBQ96QR8 312 aaKnown RBP12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 LLPHQ9BRT6 129 aaKnown RBP12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 PHF7Q9BWX1 381 aaPredicted RBP12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 CNTNAP3Q9BZ76 1288 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 GTF2IRD1Q9UHL9 959 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 BRPF3Q9ULD4 1205 aa12.71□□□□□ -0.37
VTI1BP2-201ENST00000394154 TMEM232C9JQI7 657 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 GTF2F1P35269 517 aaKnown RBP eCLIP12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 DDIT3P35638 169 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 RCAN1P53805 252 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 CCT2P78371 535 aaKnown RBP12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 NUCB2P80303 420 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 COASYQ13057 564 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 IKQ13123 557 aaPredicted RBP12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 SEC23AQ15436 765 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 ZNF618Q5T7W0 954 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 SLFN13Q68D06 897 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 APOA5Q6Q788 366 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 CATIPQ7Z7H3 387 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 ENAHQ8N8S7 591 aaPredicted RBP12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 DBF4BQ8NFT6 615 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 NEDD1Q8NHV4 660 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 RMDN1Q96DB5 314 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 ISY1Q9ULR0 285 aaKnown RBP12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
VTI1BP2-201ENST00000394154 CACNA1GO43497 2377 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 IGKV6D-41A0A0C4DH26 115 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 CPLX1O14810 134 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 GRM6O15303 877 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 PDGFBP01127 241 aaPredicted RBP12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 MMP1P03956 469 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 PDIA4P13667 645 aaKnown RBP12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 METAP2P50579 478 aaKnown RBP eCLIP12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 SCRN1Q12765 414 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 TRIM71Q2Q1W2 868 aaKnown RBP12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 C7orf31Q8N865 590 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 COPS5Q92905 334 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 RPGRIP1Q96KN7 1286 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 MPHOSPH6Q99547 160 aaKnown RBP12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 KIF3AQ9Y496 699 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 USP15Q9Y4E8 981 aaPredicted RBP12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 ZFHX4Q86UP3 3567 aa12.69□□□□□ -0.38
VTI1BP2-201ENST00000394154 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 GOLGA8AA7E2F4 631 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 PLA2G6O60733 806 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 UPP2O95045 317 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 TTLL1O95922 423 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 MMP3P08254 477 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 CALM1P0DP23 149 aa12.68□□□□□ -0.38
VTI1BP2-201ENST00000394154 CALM2P0DP24 149 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms