RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 AOX1Q06278 1338 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 ZNF233A6NK53 670 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 MAPK13O15264 365 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 SCG2P13521 617 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 TAC1P20366 129 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 MARK3P27448 753 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 PSMC1P62191 440 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 DHX9Q08211 1270 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 AOC3Q16853 763 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 SIX6OS1Q8N1H7 587 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 RBM46Q8TBY0 533 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 TEKT4Q8WW24 435 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 TRIM11Q96F44 468 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 LRRC4Q9HBW1 653 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 SARS2Q9NP81 518 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 PRDM5Q9NQX1 630 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 NRBP1Q9UHY1 535 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 MED23Q9ULK4 1368 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 USP19O94966 1318 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 NR2F2P24468 414 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 CARSP49589 748 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 BCAMP50895 628 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 BPIFB4P59827 614 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 CRLF3Q8IUI8 442 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 KIAA0825Q8IV33 1275 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 PNMA1Q8ND90 353 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 PDCD6IPQ8WUM4 868 aaKnown RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 TTC17Q96AE7 1141 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 HAUS4Q9H6D7 363 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 GCNT4Q9P109 453 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 A0A0G2JND7 137 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 OSBPP22059 807 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 ICA1Q05084 483 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 MXD4Q14582 209 aaPredicted RBP6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 PYROXD1Q8WU10 500 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 SLC7A5P2Q9GIP4 190 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 SYTL2Q9HCH5 934 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 PRKAG2Q9UGJ0 569 aa6.12□□□□□ -1.43
GAPVD1-206ENST00000394104 IQANK1A0A1B0GTG1 560 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 SOWAHDA6NJG2 315 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PRPF4O43172 522 aaKnown RBP eCLIP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 ACSL3O95573 720 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 APBA3O96018 575 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 DDIT3P35638 169 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 BBS9Q3SYG4 887 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 FAM26FQ5R3K3 315 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 IFT43Q96FT9 208 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 GSDMAQ96QA5 445 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 KLC2Q9H0B6 622 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 LGR6Q9HBX8 967 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PYCARDQ9ULZ3 195 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 GOLGA8MH3BSY2 632 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 SLFN14P0C7P3 912 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PAMP19021 973 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PCYT1AP49585 367 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PTH1RQ03431 593 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 SMAD1Q15797 465 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 ABCB5Q2M3G0 1257 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 RFX8Q6ZV50 586 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 RASSF3Q86WH2 238 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 TTC25Q96NG3 672 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 EPAS1Q99814 870 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 ZMYND12Q9H0C1 365 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 CHCHD3Q9NX63 227 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 AFF4Q9UHB7 1163 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 SNX5Q9Y5X3 404 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 CLRN2A0PK11 232 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 E9PMD0 336 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 KRT14P02533 472 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 IFNA8P32881 189 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 MRPL28Q13084 256 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 LBRQ14739 615 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 SLFN13Q68D06 897 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 RASGRP4Q8TDF6 673 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PAWRQ96IZ0 340 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 STX18Q9P2W9 335 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PCDHA13Q9Y5I0 950 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 LMTK3Q96Q04 1460 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 EIF2AK4Q9P2K8 1649 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 H0Y3Z8 333 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 GCP02774 474 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 VCAM1P19320 739 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 ADD1P35611 737 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 NEK2P51955 445 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 STAT2P52630 851 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 MRPS25P82663 173 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 DR1Q01658 176 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PTK2BQ14289 1009 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 E2F4Q16254 413 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 HIF1AQ16665 826 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 MTERF2Q49AM1 385 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PDXDC1Q6P996 788 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 TBC1D1Q86TI0 1168 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 GRAMD1CQ8IYS0 662 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 TBC1D22AQ8WUA7 517 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 ARHGEF1Q92888 912 aaKnown RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 NHEJ1Q9H9Q4 299 aaPredicted RBP6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 STK17AQ9UEE5 414 aa6.11□□□□□ -1.43
GAPVD1-206ENST00000394104 PCDHA7Q9UN72 937 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms