RNA–Protein interactions for RNA: ENST00000392995.7

PPM1D-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 2

Gene PPM1D, Length 2,996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-202ENST00000392995 CELF4Q9BZC1 486 aaKnown RBP16.31■□□□□ 0.2
PPM1D-202ENST00000392995 VAT1LQ9HCJ6 419 aa16.31■□□□□ 0.2
PPM1D-202ENST00000392995 FBXL5Q9UKA1 691 aa16.31■□□□□ 0.2
PPM1D-202ENST00000392995 PCDHA4Q9UN74 947 aa16.31■□□□□ 0.2
PPM1D-202ENST00000392995 BAZ2AQ9UIF9 1905 aaKnown RBP16.3■□□□□ 0.2
PPM1D-202ENST00000392995 A0A1W2PQJ5 194 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 ECHS1P30084 290 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
PPM1D-202ENST00000392995 TXKP42681 527 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 SCTRP47872 440 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 TRAPPC10P48553 1259 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
PPM1D-202ENST00000392995 ZNF622Q969S3 477 aaKnown RBP eCLIP16.3■□□□□ 0.2
PPM1D-202ENST00000392995 DPH5Q9H2P9 285 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 MYH6P13533 1939 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 PPEF1O14829 653 aaPredicted RBP16.3■□□□□ 0.2
PPM1D-202ENST00000392995 BBOX1O75936 387 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 RCAN1P53805 252 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 CLNS1AP54105 237 aaKnown RBP16.3■□□□□ 0.2
PPM1D-202ENST00000392995 CDK17Q00537 523 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 FAM133AQ8N9E0 248 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 DYNLL2Q96FJ2 89 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 PYM1Q9BRP8 204 aaKnown RBP16.3■□□□□ 0.2
PPM1D-202ENST00000392995 BRIP1Q9BX63 1249 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 L3MBTL1Q9Y468 752 aa16.3■□□□□ 0.2
PPM1D-202ENST00000392995 HMGB1P1B2RPK0 211 aaPredicted RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 DAPK3O43293 454 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 COPB2P35606 906 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 NAA25Q14CX7 972 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 ZNF804AQ7Z570 1209 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 CPLX4Q7Z7G2 160 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 UHMK1Q8TAS1 419 aaKnown RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 THOC1Q96FV9 657 aaKnown RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 AMACRQ9UHK6 382 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 FLT1P17948 1338 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 KLRG2A4D1S0 409 aaPredicted RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 USP17L3A6NCW0 530 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 USP17L4A6NCW7 530 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 MYMKA6NI61 221 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 PPP2R5BQ15173 497 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 NBPF9Q3BBW0 867 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 USP17L1Q7RTZ2 530 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 YTHDF3Q7Z739 585 aaKnown RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 H0YGN5 161 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 TRAPPC3O43617 180 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 LDHBP07195 334 aaKnown RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 HNRNPH3P31942 346 aaKnown RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 RCSD1Q6JBY9 416 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 HIBCHQ6NVY1 386 aaPredicted RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 TCP11Q8WWU5 503 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 INPP4AQ96PE3 977 aaPredicted RBP16.29■□□□□ 0.2
PPM1D-202ENST00000392995 MXD3Q9BW11 206 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 SLC12A6Q9UHW9 1150 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 NFS1Q9Y697 457 aa16.29■□□□□ 0.2
PPM1D-202ENST00000392995 CCDC189A1A4V9 331 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 GRID2IPA4D2P6 1211 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 HGSO14964 777 aaPredicted RBP16.28■□□□□ 0.2
PPM1D-202ENST00000392995 CYTH3O43739 400 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 CHRNA5P30532 468 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 PPP1R7Q15435 360 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 NELFCDQ8IXH7 590 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 LSM14BQ9BX40 385 aaKnown RBP16.28■□□□□ 0.2
PPM1D-202ENST00000392995 FGFBP2Q9BYJ0 223 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 TAF1DQ9H5J8 278 aaPredicted RBP16.28■□□□□ 0.2
PPM1D-202ENST00000392995 A1CFQ9NQ94 594 aaKnown RBP16.28■□□□□ 0.2
PPM1D-202ENST00000392995 DDAH1O94760 285 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 USP17L8P0C7I0 530 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 CALM1P0DP23 149 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 CALM2P0DP24 149 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 CALM3P0DP25 149 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 TNFRSF8P28908 595 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 DOK7Q18PE1 504 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 PNMA8AQ86V59 439 aaPredicted RBP16.28■□□□□ 0.2
PPM1D-202ENST00000392995 SPATS2Q86XZ4 545 aaKnown RBP16.28■□□□□ 0.2
PPM1D-202ENST00000392995 USP38Q8NB14 1042 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 HVCN1Q96D96 273 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 MMTAG2Q9BU76 263 aaKnown RBP16.28■□□□□ 0.2
PPM1D-202ENST00000392995 ANAPC4Q9UJX5 808 aa16.28■□□□□ 0.2
PPM1D-202ENST00000392995 TMCO5BA8MYB1 307 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 NOL4O94818 638 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 LCA5LO95447 670 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 CLTAP09496 248 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 ACTN1P12814 892 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 GLE1Q53GS7 698 aaKnown RBP16.27■□□□□ 0.2
PPM1D-202ENST00000392995 FIGNQ5HY92 759 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 FAM83BQ5T0W9 1011 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 UBAP2Q5T6F2 1119 aaKnown RBP16.27■□□□□ 0.2
PPM1D-202ENST00000392995 NAIF1Q69YI7 327 aaPredicted RBP16.27■□□□□ 0.2
PPM1D-202ENST00000392995 SGSM3Q96HU1 749 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 CAMKK2Q96RR4 588 aa16.27■□□□□ 0.2
PPM1D-202ENST00000392995 DCP1AQ9NPI6 582 aaPredicted RBP16.27■□□□□ 0.2
PPM1D-202ENST00000392995 TLDC2A0PJX2 215 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms