RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SRGAP2O75044 1071 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 USP17L1Q7RTZ2 530 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 HVCN1Q96D96 273 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 CEP170P1Q96L14 293 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 FAF1Q9UNN5 650 aaPredicted RBP14.18□□□□□ -0.14
LCA5-202ENST00000392959 STK36Q9NRP7 1315 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 SYNJ2BP-COX16A0A087WUM0 186 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 CPP00450 1065 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 TRIP13Q15645 432 aaPredicted RBP14.18□□□□□ -0.14
LCA5-202ENST00000392959 FAM160B1Q5W0V3 765 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 UNC13DQ70J99 1090 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 FAM149B1Q96BN6 582 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 TUBB6Q9BUF5 446 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 COX16Q9P0S2 106 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 PLAAQ9Y263 795 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 KDM6BO15054 1643 aa14.18□□□□□ -0.14
LCA5-202ENST00000392959 IGKV5-2P06315 115 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 KRT3P12035 628 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 ITKQ08881 620 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 UBE2SQ16763 222 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 TADA2BQ86TJ2 420 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 BHMT2Q9H2M3 363 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 SMYD2Q9NRG4 433 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 ADGRG1Q9Y653 693 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 RWDD2BP57060 319 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 TAF11Q15544 211 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 RNF169Q8NCN4 708 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 CALN1Q9BXU9 219 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 BAG5Q9UL15 447 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 GOLGA8QA0A0J9YX86 632 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 GOLGA8OA6NCC3 632 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 USP27XA6NNY8 438 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 GOLGA8NF8WBI6 632 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 SKIP12755 728 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 DYNLT1P63172 113 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 CDC37Q16543 378 aaPredicted RBP14.17□□□□□ -0.14
LCA5-202ENST00000392959 GDAP1Q8TB36 358 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 HDAC11Q96DB2 347 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 TRIM49BA6NDI0 452 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 INO80B-WBP1J3KQ70 363 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 PALMO75781 387 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 CNGA1P29973 690 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 BBS9Q3SYG4 887 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 TMCO4Q5TGY1 634 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 RAPH1Q70E73 1250 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 TBC1D10CQ8IV04 446 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 SDCCAG3Q96C92 435 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 LRGUKQ96M69 825 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 BRIP1Q9BX63 1249 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 INO80BQ9C086 356 aaPredicted RBP14.17□□□□□ -0.14
LCA5-202ENST00000392959 SH3GLB2Q9NR46 395 aa14.17□□□□□ -0.14
LCA5-202ENST00000392959 PODXLO00592 558 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 ACSL3O95573 720 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 ACTN1P12814 892 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 MECOMQ03112 1051 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 TFDP1Q14186 410 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 ERFEQ4G0M1 354 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 TBC1D1Q86TI0 1168 aaPredicted RBP14.16□□□□□ -0.14
LCA5-202ENST00000392959 PDIK1LQ8N165 341 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 ELAC2Q9BQ52 826 aaKnown RBP14.16□□□□□ -0.14
LCA5-202ENST00000392959 ZCCHC17Q9NP64 241 aaKnown RBP14.16□□□□□ -0.14
LCA5-202ENST00000392959 PFDN6O15212 129 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
LCA5-202ENST00000392959 RNF168Q8IYW5 571 aaPredicted RBP14.16□□□□□ -0.14
LCA5-202ENST00000392959 USP21Q9UK80 565 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 TTC4O95801 387 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 MMS22LQ6ZRQ5 1243 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 CNKSR1Q969H4 720 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 SNX24Q9Y343 169 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 NEO1Q92859 1461 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 PNMA6FA0A0J9YX94 578 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 MGEA5O60502 916 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 SETSIPP0DME0 302 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 PRCPP42785 496 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 MUM1L1Q5H9M0 696 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 CC2D2BQ6DHV5 1058 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 PDZD8Q8NEN9 1154 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 PPWD1Q96BP3 646 aaKnown RBP14.16□□□□□ -0.14
LCA5-202ENST00000392959 ANKRD36BP1Q96IX9 119 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 CEP72Q9P209 647 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 SCOCQ9UIL1 159 aa14.16□□□□□ -0.14
LCA5-202ENST00000392959 WDR19Q8NEZ3 1342 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 SPECC1L-ADORA2AF8WAN1 911 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 TLR3O15455 904 aaKnown RBP14.15□□□□□ -0.14
LCA5-202ENST00000392959 BBOX1O75936 387 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 GDF11O95390 407 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 ZNF449Q6P9G9 518 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 SESTD1Q86VW0 696 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 MCUQ8NE86 351 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 EPS15L1Q9UBC2 864 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 MIF4GDA9UHW6 222 aaKnown RBP14.15□□□□□ -0.14
LCA5-202ENST00000392959 ESRRAP11474 423 aaPredicted RBP14.15□□□□□ -0.14
LCA5-202ENST00000392959 DDIT3P35638 169 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 GGCXP38435 758 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 IGBP1P78318 339 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 TFAMQ00059 246 aaKnown RBP14.15□□□□□ -0.14
LCA5-202ENST00000392959 DCLK2Q8N568 766 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 MXD3Q9BW11 206 aa14.15□□□□□ -0.14
LCA5-202ENST00000392959 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
LCA5-202ENST00000392959 DNAJC17Q9NVM6 304 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms