RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 MAN1C1Q9NR34 630 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 RAB23Q9ULC3 237 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 PALD1Q9ULE6 856 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 FAM50BQ9Y247 325 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 INPP5FQ9Y2H2 1132 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ZKSCAN5Q9Y2L8 839 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 GTPBP10A4D1E9 387 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 GOLGA8IPA6NC78 632 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 USP17L5A8MUK1 530 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 FAM47E-STBD1D6RA91 191 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ZBED1O96006 694 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 STAG3L1P0CL83 205 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 HSPD1P10809 573 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 CPB1P15086 417 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ABCB4P21439 1286 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 NLRP12P59046 1061 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 MXD4Q14582 209 aaPredicted RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 TAF1CQ15572 869 aaPredicted RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 ACCSLQ4AC99 568 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 TEDDM1Q5T9Z0 273 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 SYDE2Q5VT97 1194 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 TSHZ3Q63HK5 1081 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ANGPTL8Q6UXH0 198 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 SZRD1Q7Z422 152 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 LRRC47Q8N1G4 583 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 C8orf58Q8NAV2 365 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ASAP3Q8TDY4 903 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 NSUN6Q8TEA1 469 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 ERO1AQ96HE7 468 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ABHD8Q96I13 439 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ZFP42Q96MM3 310 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 FAM207AQ9NSI2 230 aaPredicted RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 DDX41Q9UJV9 622 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 CLCA2Q9UQC9 943 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ABCC10Q5T3U5 1492 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 CCDC78A2IDD5 438 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 TARSL2A2RTX5 802 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 CSPG5O95196 566 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 KRT8P05787 483 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 RALBP11234 206 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 TCF3P15923 654 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 MAPK4P31152 587 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ZNF75DP51815 510 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 FANCCQ00597 558 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 KRT76Q01546 638 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 OCRLQ01968 901 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 YWHAHQ04917 246 aaPredicted RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 IMPG1Q17R60 797 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 HP1BP3Q5SSJ5 553 aaPredicted RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 ITPRIPL1Q6GPH6 555 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 TMTC3Q6ZXV5 915 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 MIGA2Q7L4E1 593 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 PDIK1LQ8N165 341 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 OSCP1Q8WVF1 389 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 ALKBH8Q96BT7 664 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 PARK7Q99497 189 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 HAUS4Q9H6D7 363 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 TBC1D22BQ9NU19 505 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 TAB2Q9NYJ8 693 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 NXF1Q9UBU9 619 aaKnown RBP4.29□□□□□ -1.72
UBR3-202ENST00000392632 MAPK8IP1Q9UQF2 711 aa4.29□□□□□ -1.72
UBR3-202ENST00000392632 TRAPPC8Q9Y2L5 1435 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SUPT6HQ7KZ85 1726 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 SNTNA6NMZ2 147 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 GOLGA8TH3BQL2 631 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SGK1O00141 431 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ERN1O75460 977 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 RAD17O75943 681 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 GOLGA8HP0CJ92 632 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ZAP70P43403 619 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 MXI1P50539 228 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SNX1Q13596 522 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ZSCAN23Q3MJ62 389 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 MTERF2Q49AM1 385 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 USP17L2Q6R6M4 530 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SYT10Q6XYQ8 523 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TEX9Q8N6V9 391 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 STKLD1Q8NE28 680 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TTC17Q96AE7 1141 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 CEP19Q96LK0 163 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 HEXIM2Q96MH2 286 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 TBC1D32Q96NH3 1257 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 PPP1R2P1Q96PQ5 205 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TM6SF1Q9BZW5 370 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 TXLNGQ9NUQ3 528 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 GIMAP4Q9NUV9 329 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 SENP1Q9P0U3 644 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 COPG1Q9Y678 874 aaKnown RBP4.28□□□□□ -1.72
UBR3-202ENST00000392632 SPACA6W5XKT8 324 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 NUP160Q12769 1436 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 HOXA2O43364 376 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 PRMT3O60678 531 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ZNF202O95125 648 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 ANP32DO95626 131 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 INPP5BP32019 993 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 MSH2P43246 934 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 AP3M2P53677 418 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 NCKAP1LP55160 1127 aa4.28□□□□□ -1.72
UBR3-202ENST00000392632 AP3B2Q13367 1082 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms