RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 PDLIM7Q9NR12 457 aa17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 ZMYND8Q9ULU4 1186 aaPredicted RBP17.03■□□□□ 0.32
IGHV3-53-201ENST00000390627 EMSYQ7Z589 1322 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 GSTTP1A0A1W2PQM5 241 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 FAM205CA6NFA0 338 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 DHX15O43143 795 aaKnown RBP17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 SUPT20HL2P0C7V6 817 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 FAAP100Q0VG06 881 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 ZNF746Q6NUN9 644 aaPredicted RBP17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 C7orf31Q8N865 590 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 SLC5A5Q92911 643 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 TEKT3Q9BXF9 490 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 AZI2Q9H6S1 392 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 TMEM39AQ9NV64 488 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 TELO2Q9Y4R8 837 aa17.02■□□□□ 0.32
IGHV3-53-201ENST00000390627 SLC37A4O43826 429 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 B4GALT4O60513 344 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 GAS7O60861 476 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 CD4P01730 458 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 SYN1P17600 705 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 LRCH2Q5VUJ6 765 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 TRIM50Q86XT4 487 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 NOSTRINQ8IVI9 506 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 SMAP1Q8IYB5 467 aaPredicted RBP17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 ETNPPLQ8TBG4 499 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 GLG1Q92896 1179 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 UIMC1Q96RL1 719 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 SMARCAD1Q9H4L7 1026 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 ERAP1Q9NZ08 941 aa17.01■□□□□ 0.31
IGHV3-53-201ENST00000390627 TNRC18O15417 2968 aaPredicted RBP17■□□□□ 0.31
IGHV3-53-201ENST00000390627 KIAA0355O15063 1070 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 TBX3O15119 743 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 LGR5O75473 907 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 ATG7O95352 703 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 CCNE2O96020 404 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 PDCP20941 246 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 LARP1BQ659C4 914 aaKnown RBP17■□□□□ 0.31
IGHV3-53-201ENST00000390627 MIS18BP1Q6P0N0 1132 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 FAM20AQ96MK3 541 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 HDAC6Q9UBN7 1215 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 GTF2IRD1Q9UHL9 959 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 TBX21Q9UL17 535 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 NOL7Q9UMY1 257 aaKnown RBP17■□□□□ 0.31
IGHV3-53-201ENST00000390627 NOD1Q9Y239 953 aa17■□□□□ 0.31
IGHV3-53-201ENST00000390627 WDR64B1ANS9 1081 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 MARCH6O60337 910 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 PSMD10O75832 226 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 U2AF2P26368 475 aaKnown RBP eCLIP16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 TRAPPC10P48553 1259 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 SLC26A2P50443 739 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 FAM160B1Q5W0V3 765 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 POTEDQ86YR6 584 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 SLFN12Q8IYM2 578 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 LBHD1Q9BQE6 289 aaPredicted RBP16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 TRPV6Q9H1D0 765 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 KCNMB3Q9NPA1 279 aa16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 TRMT13Q9NUP7 481 aaKnown RBP16.99■□□□□ 0.31
IGHV3-53-201ENST00000390627 TRIM43BA6NCK2 446 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 BACH1O14867 736 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 NEMFO60524 1076 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 BAG4O95429 457 aaKnown RBP16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 PSAPP07602 524 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 SMIM10L2AP0DMW4 78 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 SMIM10L2BP0DMW5 78 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 GNAT1P11488 350 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 RAG1P15918 1043 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 SFNP31947 248 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 STAT5BP51692 787 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 JAK3P52333 1124 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 ORC2Q13416 577 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 PTGISQ16647 500 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 GDF6Q6KF10 455 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 ABHD15Q6UXT9 468 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 PLPPR4Q7Z2D5 763 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 SH3RF1Q7Z6J0 888 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 RDM1Q8NG50 284 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 TNPO1Q92973 898 aaKnown RBP16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 TRIM43Q96BQ3 446 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 SAMM50Q9Y512 469 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 PCDHA10Q9Y5I2 948 aa16.98■□□□□ 0.31
IGHV3-53-201ENST00000390627 DNAH12Q6ZR08 3092 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 IGKV6D-21A0A0A0MT36 114 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 C17orf102A2RUQ5 167 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 CHMP2AO43633 222 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 HSP90AA1P07900 732 aaKnown RBP16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 ATP2B1P20020 1258 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 MARK3P27448 753 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 CALCRLQ16602 461 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 AFAP1L1Q8TED9 768 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 GJA10Q969M2 543 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 PCYT2Q99447 389 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 UNC45AQ9H3U1 944 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 ZNF302Q9NR11 478 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 DISC1Q9NRI5 854 aa16.97■□□□□ 0.31
IGHV3-53-201ENST00000390627 NRCAMQ92823 1304 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms