RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 PLEKHG2Q9H7P9 1386 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 HMGB1P1B2RPK0 211 aaPredicted RBP17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 NOP56O00567 594 aaKnown RBP17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 SBK1Q52WX2 424 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 CC2D2BQ6DHV5 1058 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 POMGNT1Q8WZA1 660 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 IL17RAQ96F46 866 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 DBNDD1Q9H9R9 158 aa17.54■□□□□ 0.4
PTPRN2-201ENST00000389413 BPIFB4P59827 614 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 PTK2Q05397 1052 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 CCDC13Q8IYE1 715 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 E9PMD0 336 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 STAT2P52630 851 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 NKX1-1Q15270 411 aaPredicted RBP17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 EDEM3Q9BZQ6 932 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 PTPN22Q9Y2R2 807 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 ZNF131P52739 623 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 KCNH2Q12809 1159 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 NFRKBQ6P4R8 1299 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 ZNF653Q96CK0 615 aa17.53■□□□□ 0.4
PTPRN2-201ENST00000389413 TARSL2A2RTX5 802 aaKnown RBP17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 MYO1CO00159 1063 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 RHOBTB3O94955 611 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 MAN1A1P33908 653 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 TNFAIP1Q13829 316 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 SF3B3Q15393 1217 aaKnown RBP17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 CCDC14Q49A88 953 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 MAP3K14Q99558 947 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 SPZ1Q9BXG8 430 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 UBE2TQ9NPD8 197 aaPredicted RBP17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 CLNS1AP54105 237 aaKnown RBP17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 LGSNQ5TDP6 509 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 CCDC197Q8NCU1 140 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 ST7Q9NRC1 585 aa17.52■□□□□ 0.4
PTPRN2-201ENST00000389413 KRT19P08727 400 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 YWHAEP62258 255 aaKnown RBP17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 APBB1IPQ7Z5R6 666 aaPredicted RBP17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 REXO1L1PQ8IX06 675 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 GSPT2Q8IYD1 628 aaKnown RBP17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 FBXL16Q8N461 479 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 PCIF1Q9H4Z3 704 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 APBA3O96018 575 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 SRGNP10124 158 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 ARMC9Q7Z3E5 817 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 COG1Q8WTW3 980 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 FMO2Q99518 471 aa17.52■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L15C9J2P7 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L13C9JLJ4 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L11C9JVI0 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L18D6R9N7 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L22D6RA61 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L17D6RBQ6 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L19D6RCP7 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L20D6RJB6 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 TDP2O95551 362 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 GYPCP04921 128 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L24Q0WX57 530 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L6PQ6QN14 398 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 DCAF4Q8WV16 495 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 HNRNPDLO14979 420 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 HOXA13P31271 388 aaPredicted RBP17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 PCK1P35558 622 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 RASSF2P50749 326 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 SNX16P57768 344 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 PPP1R21Q6ZMI0 780 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 MCUR1Q96AQ8 359 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 CNOT10Q9H9A5 744 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 ATF7P17544 494 aaPredicted RBP17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 MAP2K2P36507 400 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 EIF3BP55884 814 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 SFR1Q86XK3 245 aa17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 NOVA2Q9UNW9 492 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-201ENST00000389413 CTNND1O60716 968 aaKnown RBP17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 CIB2O75838 187 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 CAMTA2O94983 1202 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 IFNAR2P48551 515 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 CTTNQ14247 550 aaKnown RBP17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 CFAP157Q5JU67 520 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 TMEM179Q6ZVK1 233 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 ANAPC4Q9UJX5 808 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 ZSCAN20P17040 1043 aaPredicted RBP17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 POLD1P28340 1107 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 DR1Q01658 176 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 CCDC62Q6P9F0 684 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 NEK9Q8TD19 979 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 POTEB3A0JP26 581 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 POTECB2RU33 542 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 MXI1P50539 228 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 NEDD9Q14511 834 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 POTEBQ6S5H4 581 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 RSAD2Q8WXG1 361 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 ARHGEF2Q92974 986 aaKnown RBP17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 SERPINA10Q9UK55 444 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 ZNF148Q9UQR1 794 aa17.5■□□□□ 0.39
PTPRN2-201ENST00000389413 USP17L10C9JJH3 530 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms