RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 TBR1Q16650 682 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 SKIDA1Q1XH10 827 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 SPTY2D1Q68D10 685 aaPredicted RBP2.72□□□□□ -1.97
SNORA40-201ENST00000388090 HEATR6Q6AI08 1181 aaKnown RBP2.72□□□□□ -1.97
SNORA40-201ENST00000388090 VASNQ6EMK4 673 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 RUFY4Q6ZNE9 571 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 MRGPREQ86SM8 312 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 ZNF513Q8N8E2 541 aaPredicted RBP2.72□□□□□ -1.97
SNORA40-201ENST00000388090 CFHR4Q92496 578 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 FGD4Q96M96 766 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 NT5C1AQ9BXI3 368 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 SYNPO2LQ9H987 977 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 ASH2LQ9UBL3 628 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 PACSIN3Q9UKS6 424 aa2.72□□□□□ -1.97
SNORA40-201ENST00000388090 PPM1BO75688 479 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 BRD1O95696 1058 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 IL18BPO95998 194 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 IMPDH2P12268 514 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 GLRBP48167 497 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 XPCQ01831 940 aaPredicted RBP2.71□□□□□ -1.98
SNORA40-201ENST00000388090 PDE4CQ08493 712 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 NFYCQ13952 458 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 GRM7Q14831 915 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 ADAT2Q7Z6V5 191 aaKnown RBP2.71□□□□□ -1.98
SNORA40-201ENST00000388090 SGMS1Q86VZ5 419 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 VRK3Q8IV63 474 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 CCDC103Q8IW40 242 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 THEMISQ8N1K5 641 aaPredicted RBP2.71□□□□□ -1.98
SNORA40-201ENST00000388090 C9orf106Q8NAJ2 232 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 TTLL11Q8NHH1 800 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 NPLOC4Q8TAT6 608 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 FRS2Q8WU20 508 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.71□□□□□ -1.98
SNORA40-201ENST00000388090 TMEM169Q96HH4 297 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 C12orf65Q9H3J6 166 aaKnown RBP2.71□□□□□ -1.98
SNORA40-201ENST00000388090 MYOTQ9UBF9 498 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 NR2E1Q9Y466 385 aa2.71□□□□□ -1.98
SNORA40-201ENST00000388090 RPS6KA4O75676 772 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 POLD1P28340 1107 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 GTF2A2P52657 109 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 TOP3AQ13472 1001 aaPredicted RBP2.7□□□□□ -1.98
SNORA40-201ENST00000388090 ZMAT1Q5H9K5 638 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 ADGRE4PQ86SQ3 457 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 RBBP8NLQ8NC74 664 aaPredicted RBP2.7□□□□□ -1.98
SNORA40-201ENST00000388090 PHOSPHO1Q8TCT1 267 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 PRDM13Q9H4Q3 707 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 NRDE2Q9H7Z3 1164 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 MSL2Q9HCI7 577 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 ARHGAP20Q9P2F6 1191 aa2.7□□□□□ -1.98
SNORA40-201ENST00000388090 COA3Q9Y2R0 106 aaPredicted RBP2.7□□□□□ -1.98
SNORA40-201ENST00000388090 ARHGAP6O43182 974 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 SORBS3O60504 671 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 CUTAO60888 179 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 CLK3P49761 638 aaKnown RBP2.69□□□□□ -1.98
SNORA40-201ENST00000388090 RRADP55042 308 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 HHEXQ03014 270 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 GNPTABQ3T906 1256 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 IQCEQ6IPM2 695 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 RHOUQ7L0Q8 258 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 GPR135Q8IZ08 494 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 SMOC1Q9H4F8 434 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 TIMELESSQ9UNS1 1208 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 COX11Q9Y6N1 276 aa2.69□□□□□ -1.98
SNORA40-201ENST00000388090 GRID2IPA4D2P6 1211 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 ANKRD33BA6NCL7 494 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 CAPN14A8MX76 684 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 H7BY64 318 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 CYP27B1O15528 508 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 KCNH1O95259 989 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 PDE6AP16499 860 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 PFKPQ01813 784 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 GRIN1Q05586 938 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 MAPK7Q13164 816 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 D2HGDHQ8N465 521 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 RCBTB1Q8NDN9 531 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 CLEC4DQ8WXI8 215 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 KLHL6Q8WZ60 621 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 TACO1Q9BSH4 297 aaKnown RBP2.68□□□□□ -1.98
SNORA40-201ENST00000388090 NELFAQ9H3P2 528 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 R3HDMLQ9H3Y0 253 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 APEX2Q9UBZ4 518 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 VTI1BQ9UEU0 232 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 PUF60Q9UHX1 559 aaKnown RBP2.68□□□□□ -1.98
SNORA40-201ENST00000388090 PCDHB10Q9UN67 800 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 EMC9Q9Y3B6 208 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 IVNS1ABPQ9Y6Y0 642 aa2.68□□□□□ -1.98
SNORA40-201ENST00000388090 ESYT3A0FGR9 886 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 ZNF839A8K0R7 811 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 KIAA0355O15063 1070 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 DGKIO75912 1065 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 POU3F3P20264 500 aaPredicted RBP2.67□□□□□ -1.98
SNORA40-201ENST00000388090 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 PTGS2P35354 604 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 ETV4P43268 484 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 SCNN1GP51170 649 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 CRHR2Q13324 411 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 TOB2Q14106 344 aaPredicted RBP2.67□□□□□ -1.98
SNORA40-201ENST00000388090 STRIP1Q5VSL9 837 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 CD276Q5ZPR3 534 aa2.67□□□□□ -1.98
SNORA40-201ENST00000388090 E4F1Q66K89 784 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms