RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 ZMAT4Q9H898 229 aa6.22□□□□□ -1.41
RNU6-549P-201ENST00000384433 RC3H2Q9HBD1 1191 aaKnown RBP6.22□□□□□ -1.41
RNU6-549P-201ENST00000384433 TOMM22Q9NS69 142 aa6.22□□□□□ -1.41
RNU6-549P-201ENST00000384433 MYOTQ9UBF9 498 aa6.22□□□□□ -1.41
RNU6-549P-201ENST00000384433 ASH2LQ9UBL3 628 aa6.22□□□□□ -1.41
RNU6-549P-201ENST00000384433 SPO11Q9Y5K1 396 aa6.22□□□□□ -1.41
RNU6-549P-201ENST00000384433 B3GALT1Q9Y5Z6 326 aa6.22□□□□□ -1.41
RNU6-549P-201ENST00000384433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 TCRBV5S2A0A599 114 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 KRIT1O00522 736 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 HYAL3O43820 417 aaPredicted RBP6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 ADAM23O75077 832 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 CLASP2O75122 1294 aaKnown RBP6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 C4BPAP04003 597 aaKnown RBP6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 TMEM253P0C7T8 217 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 PNLIPP16233 465 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 RAB27AP51159 221 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 TMEM132BQ14DG7 1078 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 DDB1Q16531 1140 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 FIGNQ5HY92 759 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 BTBD8Q5XKL5 378 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 KCTD1Q719H9 257 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 C11orf74Q86VG3 221 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 ABI1Q8IZP0 508 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 PANK1Q8TE04 598 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 SMOC1Q9H4F8 434 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 TOPORSQ9NS56 1045 aaPredicted RBP6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 ATP23Q9Y6H3 246 aa6.21□□□□□ -1.42
RNU6-549P-201ENST00000384433 SHTN1A0MZ66 631 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 F8W031 263 aaPredicted RBP6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 BUB1BO60566 1050 aaPredicted RBP6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 MT-CO1P00395 513 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 PTPN1P18031 435 aaKnown RBP6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 THBS2P35442 1172 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 SLC6A11P48066 632 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 NEK2P51955 445 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 EPHA5P54756 1037 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 PDCD1Q15116 288 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 INAVAQ3KP66 663 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 CATSPEREQ5SY80 951 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 MILR1Q7Z6M3 343 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 ABHD4Q8TB40 342 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 AHCYL2Q96HN2 611 aaKnown RBP6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 SEMA4AQ9H3S1 761 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 RIC8BQ9NVN3 520 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 C14orf119Q9NWQ9 140 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 PCDHB4Q9Y5E5 795 aa6.2□□□□□ -1.42
RNU6-549P-201ENST00000384433 NUDT19A8MXV4 375 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 FZD9O00144 591 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 AKAP10O43572 662 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 SCAND1P57086 179 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 OCRLQ01968 901 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 PCBP2Q15366 365 aaKnown RBP eCLIP6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 ZNF174Q15697 407 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 NFE2Q16621 373 aaPredicted RBP6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 NLGN4XQ8N0W4 816 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 LILRA2Q8N149 483 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 SEC14L1Q92503 715 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 RTF1Q92541 710 aaKnown RBP6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 HOOK2Q96ED9 719 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 CCDC120Q96HB5 630 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 RTFDC1Q9BY42 306 aaPredicted RBP6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 ZNF652Q9Y2D9 606 aa6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 YBX2Q9Y2T7 364 aaKnown RBP6.19□□□□□ -1.42
RNU6-549P-201ENST00000384433 K7ESF4 209 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 SRGAP3O43295 1099 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 H2AFYO75367 372 aaKnown RBP6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 ULK1O75385 1050 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 CYBBP04839 570 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 MMEP08473 750 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 MYBL2P10244 700 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 SESN3P58005 492 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 ERVFRD-1P60508 538 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 PRR5P85299 388 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 ZMYM1Q5SVZ6 1142 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 CYP4F22Q6NT55 531 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 CC2D1AQ6P1N0 951 aaPredicted RBP6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 PAQR3Q6TCH7 311 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 RPTNQ6XPR3 784 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 EP400NLQ6ZTU2 488 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 CABP7Q86V35 215 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 DCP2Q8IU60 420 aaKnown RBP6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 AGBL5Q8NDL9 886 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 ZNF496Q96IT1 587 aaPredicted RBP6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 PCIF1Q9H4Z3 704 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 AASDHPPTQ9NRN7 309 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 KCNH7Q9NS40 1196 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 RBPJLQ9UBG7 517 aa6.18□□□□□ -1.42
RNU6-549P-201ENST00000384433 PRAMEF25A6NGN4 478 aa6.17□□□□□ -1.42
RNU6-549P-201ENST00000384433 HIP1RO75146 1068 aa6.17□□□□□ -1.42
RNU6-549P-201ENST00000384433 FBXO21O94952 628 aa6.17□□□□□ -1.42
RNU6-549P-201ENST00000384433 RAC2P15153 192 aa6.17□□□□□ -1.42
RNU6-549P-201ENST00000384433 EPHB1P54762 984 aa6.17□□□□□ -1.42
RNU6-549P-201ENST00000384433 SNX17Q15036 470 aa6.17□□□□□ -1.42
RNU6-549P-201ENST00000384433 PTPN21Q16825 1174 aa6.17□□□□□ -1.42
RNU6-549P-201ENST00000384433 ADGRF1Q5T601 910 aa6.17□□□□□ -1.42
RNU6-549P-201ENST00000384433 RASSF3Q86WH2 238 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms