RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PAQR3Q6TCH7 311 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 MILR1Q7Z6M3 343 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 FMNL3Q8IVF7 1028 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 NOSTRINQ8IVI9 506 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 ZZZ3Q8IYH5 903 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 ABHD4Q8TB40 342 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 CCDC8Q9H0W5 538 aaPredicted RBP7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 SP110Q9HB58 689 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 AASDHPPTQ9NRN7 309 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 MBNL3Q9NUK0 354 aaKnown RBP7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 RIC8BQ9NVN3 520 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 CTNND2Q9UQB3 1225 aa7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 NOC2LQ9Y3T9 749 aaKnown RBP7.25□□□□□ -1.25
RNU6-40P-201ENST00000384254 SRGAP3O43295 1099 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 FBXO21O94952 628 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 ZBTB7AO95365 584 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 MPOP05164 745 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 ZBTB48P10074 688 aaPredicted RBP7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 CD40P25942 277 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 TUSC3Q13454 348 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 NR1I3Q14994 352 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 TIGD5Q53EQ6 642 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 BTBD8Q5XKL5 378 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 CC2D1AQ6P1N0 951 aaPredicted RBP7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 SH3RF2Q8TEC5 729 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 CHMP4CQ96CF2 233 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 ELF4Q99607 663 aaPredicted RBP7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 YIPF4Q9BSR8 244 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 C19orf73Q9NVV2 129 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 ASH2LQ9UBL3 628 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 ADAMTS6Q9UKP5 1117 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 PALD1Q9ULE6 856 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 B3GALT1Q9Y5Z6 326 aa7.24□□□□□ -1.25
RNU6-40P-201ENST00000384254 E2F8A0AVK6 867 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 PRAMEF25A6NGN4 478 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 TADA3O75528 432 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 DBHP09172 617 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 YBX3P16989 372 aaKnown RBP eCLIP7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 PTPN1P18031 435 aaKnown RBP7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 CCND1P24385 295 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 PHC1P78364 1004 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 TMEM62Q0P6H9 643 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 CREB3L3Q68CJ9 461 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 CLRN3Q8NCR9 226 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 TNFRSF12AQ9NP84 129 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 THRAP3Q9Y2W1 955 aaKnown RBP7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 SIT1Q9Y3P8 196 aa7.23□□□□□ -1.25
RNU6-40P-201ENST00000384254 ZC3H12DA2A288 527 aaKnown RBP7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 F8W031 263 aaPredicted RBP7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 MYBL2P10244 700 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 EPHA5P54756 1037 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 SLC9A5Q14940 896 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 PPP2R5AQ15172 486 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 TERF2Q15554 542 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 GPR158Q5T848 1215 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 NFXL1Q6ZNB6 911 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 RASSF3Q86WH2 238 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 NME9Q86XW9 330 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 TRIM8Q9BZR9 551 aa7.22□□□□□ -1.25
RNU6-40P-201ENST00000384254 SHTN1A0MZ66 631 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 NUDT19A8MXV4 375 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 K7ESF4 209 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 GABRDO14764 452 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 TGM5O43548 720 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 BUB1BO60566 1050 aaPredicted RBP7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 CFBP00751 764 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 GALK1P51570 392 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 ERVFRD-1P60508 538 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 KLF1Q13351 362 aaPredicted RBP7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 RAB3GAP1Q15042 981 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 PTPN21Q16825 1174 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 ABCB5Q2M3G0 1257 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 ADGRF1Q5T601 910 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 OLFML2BQ68BL8 750 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 FRMD7Q6ZUT3 714 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 RBM12BQ8IXT5 1001 aaKnown RBP7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 ZNF610Q8N9Z0 462 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 DLG3Q92796 817 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 KIRREL1Q96J84 757 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 PCGF6Q9BYE7 350 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 RNF32Q9H0A6 362 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 SLC6A17Q9H1V8 727 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 RXFP1Q9HBX9 757 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 C14orf119Q9NWQ9 140 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 KCNG1Q9UIX4 513 aa7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 YBX2Q9Y2T7 364 aaKnown RBP7.21□□□□□ -1.26
RNU6-40P-201ENST00000384254 TCRBV5S2A0A599 114 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 FOXP2O15409 715 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 SGSM2O43147 1006 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 ITGB7P26010 798 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 PDE6BP35913 854 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 FNTBP49356 437 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 SMAD3P84022 425 aaKnown RBP7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 GRIN1Q05586 938 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 MCL1Q07820 350 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 ADCY1Q08828 1119 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 LRP8Q14114 963 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 LRRC32Q14392 662 aa7.2□□□□□ -1.26
RNU6-40P-201ENST00000384254 SMAD2Q15796 467 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms