RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 NEDD9Q14511 834 aa26.13■■□□□ 1.77
VLDLR-201ENST00000382096 TMEM192Q8IY95 271 aa26.13■■□□□ 1.77
VLDLR-201ENST00000382096 BANK1Q8NDB2 785 aa26.13■■□□□ 1.77
VLDLR-201ENST00000382096 APBB2Q92870 758 aa26.13■■□□□ 1.77
VLDLR-201ENST00000382096 GPR20Q99678 358 aa26.13■■□□□ 1.77
VLDLR-201ENST00000382096 SPATA31C2B4DYI2 1134 aa26.12■■□□□ 1.77
VLDLR-201ENST00000382096 PRC1O43663 620 aa26.12■■□□□ 1.77
VLDLR-201ENST00000382096 GNAT1P11488 350 aa26.12■■□□□ 1.77
VLDLR-201ENST00000382096 SSTR3P32745 418 aaPredicted RBP26.12■■□□□ 1.77
VLDLR-201ENST00000382096 ADAM17P78536 824 aa26.12■■□□□ 1.77
VLDLR-201ENST00000382096 SEMA3FQ13275 785 aa26.12■■□□□ 1.77
VLDLR-201ENST00000382096 GPM6BQ13491 265 aa26.12■■□□□ 1.77
VLDLR-201ENST00000382096 TMTC2Q8N394 836 aa26.12■■□□□ 1.77
VLDLR-201ENST00000382096 PABPC5Q96DU9 382 aaKnown RBP26.12■■□□□ 1.77
VLDLR-201ENST00000382096 SH2B2O14492 632 aaPredicted RBP26.11■■□□□ 1.77
VLDLR-201ENST00000382096 SLC27A2O14975 620 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 UPP2O95045 317 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 KIF5BP33176 963 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 MCM5P33992 734 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 NECTIN1Q15223 517 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 FAM26DQ5JW98 314 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 CASC1Q6TDU7 716 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 CYFIP1Q7L576 1253 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 CTCFLQ8NI51 663 aaPredicted RBP26.11■■□□□ 1.77
VLDLR-201ENST00000382096 TMEM87BQ96K49 555 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 LZTS2Q9BRK4 669 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 IFIH1Q9BYX4 1025 aaKnown RBP26.11■■□□□ 1.77
VLDLR-201ENST00000382096 SETD4Q9NVD3 440 aa26.11■■□□□ 1.77
VLDLR-201ENST00000382096 H3BQ06 376 aaPredicted RBP26.1■■□□□ 1.77
VLDLR-201ENST00000382096 FIBPO43427 364 aa26.1■■□□□ 1.77
VLDLR-201ENST00000382096 ALADP13716 330 aa26.1■■□□□ 1.77
VLDLR-201ENST00000382096 LIFRP42702 1097 aa26.1■■□□□ 1.77
VLDLR-201ENST00000382096 TCEAL5Q5H9L2 206 aa26.1■■□□□ 1.77
VLDLR-201ENST00000382096 TRIM50Q86XT4 487 aa26.1■■□□□ 1.77
VLDLR-201ENST00000382096 MYL10Q9BUA6 226 aa26.1■■□□□ 1.77
VLDLR-201ENST00000382096 NSUN3Q9H649 340 aaKnown RBP26.1■■□□□ 1.77
VLDLR-201ENST00000382096 ZNF215Q9UL58 517 aaPredicted RBP26.1■■□□□ 1.77
VLDLR-201ENST00000382096 WDFY4Q6ZS81 3184 aa26.1■■□□□ 1.77
VLDLR-201ENST00000382096 COL9A3Q14050 684 aaPredicted RBP26.09■■□□□ 1.77
VLDLR-201ENST00000382096 LMBR1Q8WVP7 490 aa26.09■■□□□ 1.77
VLDLR-201ENST00000382096 RRP36Q96EU6 259 aaKnown RBP26.09■■□□□ 1.77
VLDLR-201ENST00000382096 TTC3P53804 2025 aa26.09■■□□□ 1.77
VLDLR-201ENST00000382096 PIK3CDO00329 1044 aa26.08■■□□□ 1.77
VLDLR-201ENST00000382096 GNAQP50148 359 aa26.08■■□□□ 1.77
VLDLR-201ENST00000382096 BMP2KLQ5H9B9 411 aa26.08■■□□□ 1.77
VLDLR-201ENST00000382096 CREB3L3Q68CJ9 461 aa26.08■■□□□ 1.77
VLDLR-201ENST00000382096 KIAA1671Q9BY89 1806 aa26.08■■□□□ 1.77
VLDLR-201ENST00000382096 C5orf67F2Z3F1 127 aa26.07■■□□□ 1.76
VLDLR-201ENST00000382096 PIBF1Q8WXW3 757 aa26.07■■□□□ 1.76
VLDLR-201ENST00000382096 SENP7Q9BQF6 1050 aa26.07■■□□□ 1.76
VLDLR-201ENST00000382096 RTEL1Q9NZ71 1219 aa26.07■■□□□ 1.76
VLDLR-201ENST00000382096 PRKAG3Q9UGI9 489 aa26.07■■□□□ 1.76
VLDLR-201ENST00000382096 FAM50BQ9Y247 325 aa26.07■■□□□ 1.76
VLDLR-201ENST00000382096 NRCAMQ92823 1304 aa26.07■■□□□ 1.76
VLDLR-201ENST00000382096 LOXHD1Q8IVV2 1947 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 PLEKHA8P1O95397 391 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 LINC00271P0C7V0 271 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 CALM1P0DP23 149 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 CALM2P0DP24 149 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 CALM3P0DP25 149 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 ARHGAP4P98171 946 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 PCNX4Q63HM2 1172 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 RPAINQ86UA6 219 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 SRBD1Q8N5C6 995 aaKnown RBP26.06■■□□□ 1.76
VLDLR-201ENST00000382096 IL17RAQ96F46 866 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 TELO2Q9Y4R8 837 aa26.06■■□□□ 1.76
VLDLR-201ENST00000382096 CCDC69A6NI79 296 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 MEIS2O14770 477 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 CHRNA1P02708 482 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 ZP2Q05996 745 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 XRRA1Q6P2D8 792 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 NFXL1Q6ZNB6 911 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 CENPQQ7L2Z9 268 aaPredicted RBP26.05■■□□□ 1.76
VLDLR-201ENST00000382096 FIBCD1Q8N539 461 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 EHMT1Q9H9B1 1298 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 RC3H2Q9HBD1 1191 aaKnown RBP26.05■■□□□ 1.76
VLDLR-201ENST00000382096 ANO2Q9NQ90 1003 aa26.05■■□□□ 1.76
VLDLR-201ENST00000382096 SEC63Q9UGP8 760 aaKnown RBP26.05■■□□□ 1.76
VLDLR-201ENST00000382096 DCXO43602 365 aa26.04■■□□□ 1.76
VLDLR-201ENST00000382096 NCK2O43639 380 aa26.04■■□□□ 1.76
VLDLR-201ENST00000382096 CTNNB1P35222 781 aa26.04■■□□□ 1.76
VLDLR-201ENST00000382096 UTP14CQ5TAP6 766 aaKnown RBP26.04■■□□□ 1.76
VLDLR-201ENST00000382096 SGMS1Q86VZ5 419 aa26.04■■□□□ 1.76
VLDLR-201ENST00000382096 RWDD3Q9Y3V2 267 aa26.04■■□□□ 1.76
VLDLR-201ENST00000382096 POTEB3A0JP26 581 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 RB1P06400 928 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 CTC1Q2NKJ3 1217 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 TAF2Q6P1X5 1199 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 USP17L6PQ6QN14 398 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 POTEBQ6S5H4 581 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 EP400NLQ6ZTU2 488 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 GIMAP8Q8ND71 665 aaPredicted RBP26.03■■□□□ 1.76
VLDLR-201ENST00000382096 SMARCC2Q8TAQ2 1214 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 CUL5Q93034 780 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 C11orf84Q9BUA3 381 aaPredicted RBP26.03■■□□□ 1.76
VLDLR-201ENST00000382096 LMAN2LQ9H0V9 348 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 CLDND1Q9NY35 253 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 ADGRA3Q8IWK6 1321 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 ZNF318Q5VUA4 2279 aa26.03■■□□□ 1.76
VLDLR-201ENST00000382096 C19orf67A6NJJ6 358 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms