RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 VPS45Q9NRW7 570 aa6.2□□□□□ -1.42
RFC1-202ENST00000381897 DDX56Q9NY93 547 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 UTP11Q9Y3A2 253 aaKnown RBP6.2□□□□□ -1.42
RFC1-202ENST00000381897 ENC1O14682 589 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CALM1P0DP23 149 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CALM2P0DP24 149 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CALM3P0DP25 149 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 HSPD1P10809 573 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 MYL6BP14649 208 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 SCP2P22307 547 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 MAGEA1P43355 309 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 SCNN1BP51168 640 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 EIF3BP55884 814 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 EIF4A1P60842 406 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 VWA3BQ502W6 1294 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 ZMYM1Q5SVZ6 1142 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 ARMC3Q5W041 872 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 ALKBH2Q6NS38 261 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 C16orf87Q6PH81 154 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 MFSD6Q6ZSS7 791 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 TRAPPC11Q7Z392 1133 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CATIPQ7Z7H3 387 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 DOLKQ9UPQ8 538 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 TRPC6Q9Y210 931 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 LRRC10BA6NIK2 292 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 MYO1FO00160 1098 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 SCAMP1O15126 338 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 MAP3K13O43283 966 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 KRT38O76015 456 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 RXRAP19793 462 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 LSP1P33241 339 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 UBA7P41226 1012 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 KRT71Q3SY84 523 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 C6orf163Q5TEZ5 329 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 NAA35Q5VZE5 725 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 INTS8Q75QN2 995 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 KLHL7Q8IXQ5 586 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CUL5Q93034 780 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 HVCN1Q96D96 273 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.19□□□□□ -1.42
RFC1-202ENST00000381897 NOC4LQ9BVI4 516 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 CARD10Q9BWT7 1032 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 COPRSQ9NQ92 184 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 DDX21Q9NR30 783 aaKnown RBP eCLIP6.19□□□□□ -1.42
RFC1-202ENST00000381897 BMP2KQ9NSY1 1161 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 STK38LQ9Y2H1 464 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 AP1M2Q9Y6Q5 423 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 GRID2IPA4D2P6 1211 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 SMAPO00193 183 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 TAF4O00268 1085 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CLTAP09496 248 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 SMARCA1P28370 1054 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 RFC1P35251 1148 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 NLRP5P59047 1200 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 PTGISQ16647 500 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CWF19L2Q2TBE0 894 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 CYB5D1Q6P9G0 228 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 KRT28Q7Z3Y7 464 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 KDELC2Q7Z4H8 507 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 PHLDB2Q86SQ0 1253 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CCDC13Q8IYE1 715 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 ZKSCAN4Q969J2 545 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 CLIC6Q96NY7 704 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CCT8L2Q96SF2 557 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 GPR108Q9NPR9 543 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 TCP11L1Q9NUJ3 509 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 BTG4Q9NY30 223 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 AKAP7Q9P0M2 348 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 METP08581 1390 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 FRMPD2Q68DX3 1309 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 STK36Q9NRP7 1315 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 TBX3O15119 743 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 KATNA1O75449 491 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 HEXIM1O94992 359 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 HOXA7P31268 230 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 RASSF2P50749 326 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 ZBED6P86452 979 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 LRRC23Q53EV4 343 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 HAUS3Q68CZ6 603 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 HIBCHQ6NVY1 386 aaPredicted RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 RAD9BQ6WBX8 426 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 FLAD1Q8NFF5 587 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 MUL1Q969V5 352 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 SPACA7Q96KW9 195 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 RAB17Q9H0T7 212 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 THAP9Q9H5L6 903 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 CD248Q9HCU0 757 aa6.19□□□□□ -1.42
RFC1-202ENST00000381897 LARSQ9P2J5 1176 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 SRPRBQ9Y5M8 271 aaKnown RBP6.19□□□□□ -1.42
RFC1-202ENST00000381897 IFT172Q9UG01 1749 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 RIMBP3CA6NJZ7 1639 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 RIMBP3BA6NNM3 1639 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 RIMBP3Q9UFD9 1639 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 A0A1W2PQC6 194 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 A0A1W2PQJ5 194 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 KRT87PA6NCN2 255 aa6.18□□□□□ -1.42
RFC1-202ENST00000381897 ATP5J2-PTCD1G3V325 749 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms