RNA–Protein interactions for RNA: ENST00000381271.6

KLHL42-201, Transcript of kelch like family member 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL42, Length 6,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-201ENST00000381271 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
KLHL42-201ENST00000381271 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
KLHL42-201ENST00000381271 ZNF394Q53GI3 561 aa17.12■□□□□ 0.33
KLHL42-201ENST00000381271 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
KLHL42-201ENST00000381271 CYTH2Q99418 400 aa17.12■□□□□ 0.33
KLHL42-201ENST00000381271 DHX9Q08211 1270 aaKnown RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 ACBD5Q5T8D3 534 aaPredicted RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 PDCD6IPQ8WUM4 868 aaKnown RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 COL17A1Q9UMD9 1497 aaPredicted RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 EIF3CLB5ME19 914 aaKnown RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 EIF3CQ99613 913 aaKnown RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 TBX22Q9Y458 520 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 PDE8BO95263 885 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 PCCAP05165 728 aaPredicted RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 CTNND1O60716 968 aaKnown RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 MYL3P08590 195 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 USP17L8P0C7I0 530 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 MYO1EQ12965 1108 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 SMAD1Q15797 465 aaKnown RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 ANTXR1Q9H6X2 564 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 PRDM5Q9NQX1 630 aaPredicted RBP17.11■□□□□ 0.33
KLHL42-201ENST00000381271 XDHP47989 1333 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 MAP3K15Q6ZN16 1313 aa17.11■□□□□ 0.33
KLHL42-201ENST00000381271 ATICP31939 592 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 ARHGDIAP52565 204 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 NFX1Q12986 1120 aaKnown RBP17.1■□□□□ 0.33
KLHL42-201ENST00000381271 ADD3Q9UEY8 706 aaKnown RBP17.1■□□□□ 0.33
KLHL42-201ENST00000381271 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 CARMIL3Q8ND23 1372 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 H3BRJ5 948 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 GAP43P17677 238 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 ANO4Q32M45 955 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 C11orf57Q6ZUT1 292 aaPredicted RBP17.1■□□□□ 0.33
KLHL42-201ENST00000381271 TRIM59Q8IWR1 403 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 TRIM11Q96F44 468 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 CDC23Q9UJX2 597 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 EXOC1LA0A1B0GW35 172 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 BMP3P12645 472 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 MED4Q9NPJ6 270 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 WDR64B1ANS9 1081 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
KLHL42-201ENST00000381271 SIK1P57059 783 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 PDXDC2PQ6P474 469 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
KLHL42-201ENST00000381271 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 GCNAQ96QF7 691 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 MMTAG2Q9BU76 263 aaKnown RBP17.1■□□□□ 0.33
KLHL42-201ENST00000381271 RPF1Q9H9Y2 349 aaKnown RBP17.1■□□□□ 0.33
KLHL42-201ENST00000381271 FAM8A1Q9UBU6 413 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 TTC25Q96NG3 672 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 STK17AQ9UEE5 414 aa17.1■□□□□ 0.33
KLHL42-201ENST00000381271 PGRMC1O00264 195 aaKnown RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 ESRRBO95718 433 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 CEP19Q96LK0 163 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 NHEJ1Q9H9Q4 299 aaPredicted RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 SAMSN1Q9NSI8 373 aaKnown RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 NOVA2Q9UNW9 492 aaKnown RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 GPATCH4Q5T3I0 446 aaKnown RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 KRT80Q6KB66 452 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 ZBED2Q9BTP6 218 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 ARHGEF10O15013 1369 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 USP17L3A6NCW0 530 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 USP17L4A6NCW7 530 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 ATP6V1E1P36543 226 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 EIF4A3P38919 411 aaKnown RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 PI16Q6UXB8 463 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 USP17L1Q7RTZ2 530 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 EFCAB13Q8IY85 973 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 ZNF233A6NK53 670 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 ACSL3O95573 720 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 ZNF658Q5TYW1 1059 aaPredicted RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 FBXO18Q8NFZ0 1043 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 DNAJC8O75937 253 aaPredicted RBP17.09■□□□□ 0.33
KLHL42-201ENST00000381271 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 SLC8A2Q9UPR5 921 aa17.09■□□□□ 0.33
KLHL42-201ENST00000381271 LUC7L3O95232 432 aaKnown RBP17.08■□□□□ 0.33
KLHL42-201ENST00000381271 TMED1Q13445 227 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 KLHL29Q96CT2 875 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.33
KLHL42-201ENST00000381271 SYNDIG1Q9H7V2 258 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 MRPL47Q9HD33 250 aaKnown RBP17.08■□□□□ 0.33
KLHL42-201ENST00000381271 EEF1DP29692 281 aaKnown RBP17.08■□□□□ 0.33
KLHL42-201ENST00000381271 USP14P54578 494 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 ESRRGP62508 458 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 KCNA1Q09470 495 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 PPP6R3Q5H9R7 873 aaPredicted RBP17.08■□□□□ 0.33
KLHL42-201ENST00000381271 EXOC8Q8IYI6 725 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 LCORLQ8N3X6 602 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 WDR48Q8TAF3 677 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 NCLNQ969V3 563 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 EMILIN3Q9NT22 766 aa17.08■□□□□ 0.33
KLHL42-201ENST00000381271 ZBED1O96006 694 aa17.08■□□□□ 0.32
KLHL42-201ENST00000381271 TRAPPC10P48553 1259 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms