RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SLC27A3Q5K4L6 730 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 C15orf52Q6ZUT6 534 aaKnown RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 NANOGNBQ7Z5D8 188 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CREG2Q8IUH2 290 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 MYOCDQ8IZQ8 938 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 MREGQ8N565 214 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 NCOA7Q8NI08 942 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 ERMNQ8TAM6 284 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CTNNBL1Q8WYA6 563 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CLIP3Q96DZ5 547 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CCDC51Q96ER9 411 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 RNF41Q9H4P4 317 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 ABCF2Q9UG63 623 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 C4AP0C0L4 1744 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 C4BP0C0L5 1744 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 TNS1Q9HBL0 1735 aaKnown RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 ZNF804BA4D1E1 1349 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 MAST3O60307 1309 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 PTPDC1A2A3K4 754 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 RNF225M0QZC1 329 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 YEATS4O95619 227 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 GSTA2P09210 222 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 HOXA10P31260 410 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 MSH2P43246 934 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 SYKP43405 635 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 SERPINB4P48594 390 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 SF3A3Q12874 501 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CNPY1Q3B7I2 92 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 TCERG1LQ5VWI1 586 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CHADLQ6NUI6 762 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CCNJLQ8IV13 435 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 NUTM2AQ8IVF1 878 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 RNF25Q96BH1 459 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 FAM89AQ96GI7 184 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 NACAP1Q9BZK3 213 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 HAUS4Q9H6D7 363 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 ABCF3Q9NUQ8 709 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CHMP2BQ9UQN3 213 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 STK38LQ9Y2H1 464 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 PCDHA5Q9Y5H7 936 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 TRIM43BA6NCK2 446 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 TMEM247A6NEH6 219 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 NDUFB5O43674 189 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 HNRNPCP07910 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 MLH1P40692 756 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CARSP49589 748 aaKnown RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 PEX5P50542 639 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CLCN2P51788 898 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 ATP11AP98196 1134 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 GSTM4Q03013 218 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 CYP26C1Q6V0L0 522 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 TRPM8Q7Z2W7 1104 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 KIF2BQ8N4N8 673 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 SPATA4Q8NEY3 305 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 ENOX1Q8TC92 643 aaKnown RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 PUS3Q9BZE2 481 aaKnown RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 ABHD10Q9NUJ1 306 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 POLR3EQ9NVU0 708 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 NFU1Q9UMS0 254 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 PLAAQ9Y263 795 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 SLC4A7Q9Y6M7 1214 aa8.16□□□□□ -1.1
CDKL5-201ENST00000379989 MYH14Q7Z406 1995 aaKnown RBP8.16□□□□□ -1.1
CDKL5-201ENST00000379989 MYH2Q9UKX2 1941 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ATP9BO43861 1147 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 HIP1RO75146 1068 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 UBOX5O94941 541 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 BCRP11274 1271 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 MATR3P43243 847 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDKL5-201ENST00000379989 GUCY2DQ02846 1103 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ITIH3Q06033 890 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ITIH4Q14624 930 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 HLFQ16534 295 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 IRGCQ6NXR0 463 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ZNF365Q70YC5 407 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ZNF572Q7Z3I7 529 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ANKS4BQ8N8V4 417 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 CHMP6Q96FZ7 201 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 TIPINQ9BVW5 301 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 SPO11Q9Y5K1 396 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 CASZ1Q86V15 1759 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 GOLGA6L10A0A0M3HER8 536 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 WFS1O76024 890 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 NDUFA10O95299 355 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 CYP21A2P08686 494 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 IDO1P14902 403 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 HOXD11P31277 338 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-201ENST00000379989 CCNFP41002 786 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 VAV2P52735 878 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 RHBDL3P58872 404 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 NLRP5P59047 1200 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 PPP2R2AP63151 447 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 SULT2A1Q06520 285 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 LSAMPQ13449 338 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 TMEM53Q6P2H8 277 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 C3orf67Q6ZVT6 689 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 MIGA2Q7L4E1 593 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 PTF1AQ7RTS3 328 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 SAMD3Q8N6K7 520 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 ZNF653Q96CK0 615 aa8.15□□□□□ -1.1
CDKL5-201ENST00000379989 CLMNQ96JQ2 1002 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms