RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 RBM5P52756 815 aaKnown RBP eCLIP8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 CCDC122Q5T0U0 273 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 C6orf89Q6UWU4 347 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 MLKLQ8NB16 471 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 SYNPO2Q9UMS6 1093 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 L3MBTL1Q9Y468 752 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 WDR87Q6ZQQ6 2873 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 NID2Q14112 1375 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 ZSCAN12O43309 604 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 ACTN1P12814 892 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 ERVK-9P63128 1117 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 GNGT1P63211 74 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 PPIL2Q13356 520 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 SCARA3Q6AZY7 606 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 RALYLQ86SE5 291 aaKnown RBP8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 IGSF9BQ9UPX0 1349 aa8.15□□□□□ -1.1
GPCPD1-201ENST00000379019 CXCL11O14625 94 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 EIF3HO15372 352 aaKnown RBP eCLIP8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 KLRC1P26715 233 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 LIFRP42702 1097 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 VEGFBP49765 207 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 TPM4P67936 248 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 CTR9Q6PD62 1173 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 GJB7Q6PEY0 223 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 AMOTL1Q8IY63 956 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 TRIM33Q9UPN9 1127 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 DAGLAQ9Y4D2 1042 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 ZEB2O60315 1214 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 GNAT2P19087 354 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 DCAF12L1Q5VU92 463 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 NAA35Q5VZE5 725 aa8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 APOBEC3HQ6NTF7 200 aaKnown RBP8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 PRPF38AQ8NAV1 312 aaKnown RBP8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 LBHD1Q9BQE6 289 aaPredicted RBP8.15□□□□□ -1.11
GPCPD1-201ENST00000379019 HOXD13P35453 343 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 PPATQ06203 517 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 PABPC4Q13310 644 aaKnown RBP eCLIP8.14□□□□□ -1.114e-6■■■■□ 20.5
GPCPD1-201ENST00000379019 CCDC96Q2M329 555 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 AS3MTQ9HBK9 375 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 ERVK-5Q9HDB9 667 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 SLC39A2Q9NP94 309 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 ATAD5Q96QE3 1844 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 TUBP50607 506 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 FOXP1Q9H334 677 aaPredicted RBP8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 SLC12A6Q9UHW9 1150 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 KIF2AO00139 706 aaPredicted RBP8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 ATP8B1O43520 1251 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 RASSF9O75901 435 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 ENOX2Q16206 610 aaKnown RBP8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 RTN1Q16799 776 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 TTC31Q49AM3 519 aaPredicted RBP8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 ERO1BQ86YB8 467 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 BLOC1S4Q9NUP1 217 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 A0A087X0T9 212 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 CTAGE15A4D2H0 777 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 LRRC53A6NM62 1247 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 FAM155AB1AL88 458 aaPredicted RBP8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 SLC37A4O43826 429 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 RPN1P04843 607 aaKnown RBP8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 HLA-DOAP06340 250 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 FAM228BP0C875 321 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 CTAGE8P0CG41 777 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 ZNF157P51786 506 aaPredicted RBP8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 SSRP1Q08945 709 aaKnown RBP8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 INF2Q27J81 1249 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 CTAGE6Q86UF2 777 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 CTAGE4Q8IX94 777 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 FAM71BQ8TC56 605 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 SLC10A4Q96EP9 437 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 SAR1BQ9Y6B6 198 aa8.14□□□□□ -1.11
GPCPD1-201ENST00000379019 CETPP11597 493 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 UBE3CQ15386 1083 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 PRCCQ92733 491 aaPredicted RBP8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 WNK4Q96J92 1243 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 ACP6Q9NPH0 428 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 SWAP70Q9UH65 585 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 SNX12Q9UMY4 172 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 PHF20L1A8MW92 1017 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 CTNND1O60716 968 aaKnown RBP8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 POTEIP0CG38 1075 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 POTEJP0CG39 1038 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 ERCC5P28715 1186 aaPredicted RBP8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 LSP1P33241 339 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 ITGB3BPQ13352 177 aaPredicted RBP8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 RASA3Q14644 834 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 SPRYD7Q5W111 196 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 PHC3Q8NDX5 983 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 SHKBP1Q8TBC3 707 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 STAG1Q8WVM7 1258 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 NSUN4Q96CB9 384 aaKnown RBP8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 PRMT6Q96LA8 375 aaPredicted RBP8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 OSBPL9Q96SU4 736 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 CXorf56Q9H5V9 222 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 LRP2BPQ9P2M1 347 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 CAPN11Q9UMQ6 739 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 SPDYE5A6NIY4 337 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 ADM5C9JUS6 153 aa8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 RBM26Q5T8P6 1007 aaKnown RBP8.13□□□□□ -1.11
GPCPD1-201ENST00000379019 FASTKD5Q7L8L6 764 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms