RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ELF3P78545 371 aaPredicted RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 EHHADHQ08426 723 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 HLTFQ14527 1009 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 C11orf91Q3C1V1 193 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 CCDC152Q4G0S7 254 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 TDRD12Q587J7 1177 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 ODF2Q5BJF6 829 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 PIGWQ7Z7B1 504 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 ZC3H3Q8IXZ2 948 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 KIAA0895Q8NCT3 520 aa8.99□□□□□ -0.97
PTPRR-203ENST00000378778 XPO6Q96QU8 1125 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 CRNKL1Q9BZJ0 848 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 FAM207AQ9NSI2 230 aaPredicted RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 BAZ2AQ9UIF9 1905 aaKnown RBP8.99□□□□□ -0.97
PTPRR-203ENST00000378778 MYH7BA7E2Y1 1941 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 CCDC169A6NNP5 214 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 NCK2O43639 380 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 HSPA6P17066 643 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 CXCR5P32302 372 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 IL6STP40189 918 aaPredicted RBP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 ERVK-9P63128 1117 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 GFPT1Q06210 699 aaPredicted RBP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 UBE4AQ14139 1066 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 ZNF268Q14587 947 aaPredicted RBP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 NONOQ15233 471 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 UAP1Q16222 522 aaPredicted RBP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 TMEM266Q2M3C6 531 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 CCDC38Q502W7 563 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 FAM83BQ5T0W9 1011 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 TMC3Q7Z5M5 1100 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 SLFN11Q7Z7L1 901 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 FAM228AQ86W67 206 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 FAXDC2Q96IV6 333 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 ZMYND12Q9H0C1 365 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 CENPHQ9H3R5 247 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 NOD2Q9HC29 1040 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 SALL4Q9UJQ4 1053 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 UTP11Q9Y3A2 253 aaKnown RBP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 MYH4Q9Y623 1939 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 PHLPP1O60346 1717 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 ABLIM1O14639 778 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 FLOT1O75955 427 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 WFS1O76024 890 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 PRKCIP41743 596 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 CCNG1P51959 295 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 ASIC2Q16515 512 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 VPS36Q86VN1 386 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 CEP57Q86XR8 500 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 COL23A1Q86Y22 540 aaPredicted RBP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 CCDC63Q8NA47 563 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 RUNDC3BQ96NL0 473 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 SPZ1Q9BXG8 430 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 TXLNGYQ9BZA5 131 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 RABEP2Q9H5N1 569 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 C6orf50Q9HD87 102 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 HAUS2Q9NVX0 235 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 NOP53Q9NZM5 478 aaKnown RBP8.98□□□□□ -0.97
PTPRR-203ENST00000378778 PARP2Q9UGN5 583 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 MTMR7Q9Y216 660 aa8.98□□□□□ -0.97
PTPRR-203ENST00000378778 ITGB4P16144 1822 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 ROBO3Q96MS0 1386 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 F8VZ95 297 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 AGTP01019 485 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 CCND1P24385 295 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 HPDP32754 393 aaPredicted RBP8.97□□□□□ -0.97
PTPRR-203ENST00000378778 GRIK3Q13003 919 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 CMPK2Q5EBM0 449 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 C6orf118Q5T5N4 469 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 MS4A14Q96JA4 679 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 IFT74Q96LB3 600 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 CCDC85AQ96PX6 553 aaPredicted RBP8.97□□□□□ -0.97
PTPRR-203ENST00000378778 NAP1L4Q99733 375 aaKnown RBP8.97□□□□□ -0.97
PTPRR-203ENST00000378778 TMEM60Q9H2L4 133 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 SAMD15Q9P1V8 674 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 FAM205AQ6ZU69 1335 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 STXBP3O00186 592 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 O00370 1275 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 MMP13P45452 471 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 ADCY2Q08462 1091 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 KLHL30Q0D2K2 578 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 KCNMA1Q12791 1236 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 DHX34Q14147 1143 aaKnown RBP8.97□□□□□ -0.97
PTPRR-203ENST00000378778 EDRF1Q3B7T1 1238 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 ZCWPW2Q504Y3 356 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 NEK8Q86SG6 692 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 MYOCDQ8IZQ8 938 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 TEX9Q8N6V9 391 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 LRRC57Q8N9N7 239 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 ARMC2Q8NEN0 867 aa8.97□□□□□ -0.97
PTPRR-203ENST00000378778 ZNF317Q96PQ6 595 aaPredicted RBP8.97□□□□□ -0.97
PTPRR-203ENST00000378778 COL5A2P05997 1499 aaPredicted RBP8.96□□□□□ -0.97
PTPRR-203ENST00000378778 E7ENQ6 273 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 EPHB6O15197 1021 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 BUB1O43683 1085 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 KLRC1P26715 233 aa8.96□□□□□ -0.97
PTPRR-203ENST00000378778 SKIV2L2P42285 1042 aaKnown RBP8.96□□□□□ -0.97
PTPRR-203ENST00000378778 TXNRD1Q16881 649 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms