RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 ERICH2A1L162 156 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 PRPHP41219 470 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 NEK3P51956 506 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 TRAF1Q13077 416 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 KRT31Q15323 416 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 KRT40Q6A162 431 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 ATP6V1G3Q96LB4 118 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 CHP1Q99653 195 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 LRRC1Q9BTT6 524 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 NDST4Q9H3R1 872 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 STRN4Q9NRL3 753 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 SPATS2LQ9NUQ6 558 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 STIM2Q9P246 746 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 POLG2Q9UHN1 485 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 SERTAD1Q9UHV2 236 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 IFIT3O14879 490 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 AHCYL1O43865 530 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 SNUPNO95149 360 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 NR1D1P20393 614 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 HNRNPH3P31942 346 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 RPS6KA3P51812 740 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 PDIA5Q14554 519 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 ERMP1Q7Z2K6 904 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 CCDC170Q8IYT3 715 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 DRAXINQ8NBI3 349 aaPredicted RBP7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 CCHCR1Q8TD31 782 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 TMBIM4Q9HC24 238 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 NGRNQ9NPE2 291 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 RWDD2AQ9UIY3 292 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 CDV3Q9UKY7 258 aaKnown RBP7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 C15orf41Q9Y2V0 281 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 BOLA1Q9Y3E2 137 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 UBR2Q8IWV8 1755 aa7.35□□□□□ -1.23
CDKAL1-202ENST00000378610 GOLGA6L7A0A1B0GV03 622 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 RASSF10A6NK89 507 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ALG1L2C9J202 215 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ENC1O14682 589 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 RASGRP1O95267 797 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ASMTLO95671 621 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 HOXC9P31274 260 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 HSPA9P38646 679 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 CLNS1AP54105 237 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 GUCY1A3Q02108 690 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 LMNB2Q03252 620 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 GRIN1Q05586 938 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 C2orf54Q08AI8 447 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ZNF268Q14587 947 aaPredicted RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 KIAA0753Q2KHM9 967 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 CWF19L2Q2TBE0 894 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 NBPF5PQ86XG9 351 aaPredicted RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 SPATA4Q8NEY3 305 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 CUL5Q93034 780 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ANAPC16Q96DE5 110 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ANKRD27Q96NW4 1050 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 SLF1Q9BQI6 1058 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 NUP58Q9BVL2 599 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 MOV10L1Q9BXT6 1211 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 AATFQ9NY61 560 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 EVLQ9UI08 416 aaPredicted RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 PDS5AQ29RF7 1337 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 A0A087X0B3 334 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 PDLIM1O00151 329 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ZNF185O15231 689 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 TCEA3O75764 348 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 F2P00734 622 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 RBP3P10745 1247 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 STAT3P40763 770 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 CASP7P55210 303 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 HLTFQ14527 1009 aaKnown RBP eCLIP7.34□□□□□ -1.232e-6■■■□□ 16.9
CDKAL1-202ENST00000378610 EZH2Q15910 746 aaKnown RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ACCSLQ4AC99 568 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 TCP11X2Q5H9J9 407 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ARMC3Q5W041 872 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 IRF2BP1Q8IU81 584 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ANKRD42Q8N9B4 389 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ZFAND2BQ8WV99 257 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 COL26A1Q96A83 441 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 CENPTQ96BT3 561 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 ZNF570Q96NI8 536 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 PLCB1Q9NQ66 1216 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 GINM1Q9NU53 330 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 HAUS2Q9NVX0 235 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 SLC5A4Q9NY91 659 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.34□□□□□ -1.232e-7■■□□□ 13.3
CDKAL1-202ENST00000378610 ZNF69Q9UC07 566 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 PCDHB9Q9Y5E1 797 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 SOS2Q07890 1332 aaPredicted RBP7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 WNK3Q9BYP7 1800 aa7.34□□□□□ -1.23
CDKAL1-202ENST00000378610 BICDL2A1A5D9 508 aa7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 M0R2C6 588 aa7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 RANBP6O60518 1105 aaKnown RBP7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 HSF2BPO75031 334 aa7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 SLC34A2O95436 690 aa7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 EPB42P16452 691 aa7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 ECHS1P30084 290 aa7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 COPB1P53618 953 aaKnown RBP7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 BLMHQ13867 455 aa7.34□□□□□ -1.24
CDKAL1-202ENST00000378610 ZNF827Q17R98 1081 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms