RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 TELO2Q9Y4R8 837 aa19.42■□□□□ 0.7
RER1-202ENST00000378512 SLC4A7Q9Y6M7 1214 aa19.42■□□□□ 0.7
RER1-202ENST00000378512 M0R2N6 131 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 PITPNM1O00562 1244 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 CPLX1O14810 134 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 LGALS2P05162 132 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 IQCF3P0C7M6 154 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 RBL2Q08999 1139 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 NPY5RQ15761 445 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 PTGISQ16647 500 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 CPLX2Q6PUV4 134 aaKnown RBP19.41■□□□□ 0.7
RER1-202ENST00000378512 RPUSD2Q8IZ73 545 aaKnown RBP19.41■□□□□ 0.7
RER1-202ENST00000378512 BICD2Q8TD16 824 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 DHX38Q92620 1227 aaKnown RBP19.41■□□□□ 0.7
RER1-202ENST00000378512 KIF2CQ99661 725 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 SLKQ9H2G2 1235 aaPredicted RBP19.41■□□□□ 0.7
RER1-202ENST00000378512 VPS54Q9P1Q0 977 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 HDAC6Q9UBN7 1215 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 MSRAQ9UJ68 235 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 STK36Q9NRP7 1315 aa19.41■□□□□ 0.7
RER1-202ENST00000378512 WDR81Q562E7 1941 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 IGLV3-22A0A075B6J6 115 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 H3BRB1 525 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 EDIL3O43854 480 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 CTDNEP1O95476 244 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 RAB30Q15771 203 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 JAKMIP3Q5VZ66 844 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 PPM1EQ8WY54 764 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 MTIF3Q9H2K0 278 aaKnown RBP19.4■□□□□ 0.7
RER1-202ENST00000378512 TUT1Q9H6E5 874 aaKnown RBP19.4■□□□□ 0.7
RER1-202ENST00000378512 NFASCO94856 1347 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 KAT6AQ92794 2004 aa19.4■□□□□ 0.7
RER1-202ENST00000378512 FAM86B1E9PN63 330 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 NOP56O00567 594 aaKnown RBP19.39■□□□□ 0.69
RER1-202ENST00000378512 FAM86B2P0C5J1 330 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 ATP2A2P16615 1042 aaKnown RBP19.39■□□□□ 0.69
RER1-202ENST00000378512 CIITAP33076 1130 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 NEK4P51957 841 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 HIC1Q14526 733 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 GPNMBQ14956 572 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 ME3Q16798 604 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 DAGLBQ8NCG7 672 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 ALG1Q9BT22 464 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 NOD1Q9Y239 953 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 TET1Q8NFU7 2136 aa19.39■□□□□ 0.69
RER1-202ENST00000378512 REV3LO60673 3130 aa19.38■□□□□ 0.69
RER1-202ENST00000378512 GSTTP1A0A1W2PQM5 241 aa19.38■□□□□ 0.69
RER1-202ENST00000378512 CDKL5O76039 1030 aa19.38■□□□□ 0.69
RER1-202ENST00000378512 LARGE1O95461 756 aa19.38■□□□□ 0.69
RER1-202ENST00000378512 ARP10275 920 aa19.38■□□□□ 0.69
RER1-202ENST00000378512 ZNF200P98182 395 aaPredicted RBP19.38■□□□□ 0.69
RER1-202ENST00000378512 C7orf31Q8N865 590 aa19.38■□□□□ 0.69
RER1-202ENST00000378512 WNT8BQ93098 351 aa19.38■□□□□ 0.69
RER1-202ENST00000378512 AGO4Q9HCK5 861 aaKnown RBP19.38■□□□□ 0.69
RER1-202ENST00000378512 ARHGEF15O94989 841 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 RBM25P49756 843 aaKnown RBP19.37■□□□□ 0.69
RER1-202ENST00000378512 ITGB3BPQ13352 177 aaPredicted RBP19.37■□□□□ 0.69
RER1-202ENST00000378512 TCTN1Q2MV58 587 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 GALNT17Q6IS24 598 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 RETREG2Q8NC44 543 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 CAGE1Q8TC20 777 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 RASGRP4Q8TDF6 673 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 SEPT1Q8WYJ6 367 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 GTF3C6Q969F1 213 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 AIFM3Q96NN9 605 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 SLC28A3Q9HAS3 691 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 PCDHA4Q9UN74 947 aa19.37■□□□□ 0.69
RER1-202ENST00000378512 EMSYQ7Z589 1322 aa19.36■□□□□ 0.69
RER1-202ENST00000378512 TCF7P36402 384 aaPredicted RBP19.36■□□□□ 0.69
RER1-202ENST00000378512 ADAM17P78536 824 aa19.36■□□□□ 0.69
RER1-202ENST00000378512 CCDC85BQ15834 202 aaPredicted RBP19.36■□□□□ 0.69
RER1-202ENST00000378512 TRIM71Q2Q1W2 868 aaKnown RBP19.36■□□□□ 0.69
RER1-202ENST00000378512 TMCO2Q7Z6W1 182 aaPredicted RBP19.36■□□□□ 0.69
RER1-202ENST00000378512 GAS2L1Q99501 681 aaPredicted RBP19.36■□□□□ 0.69
RER1-202ENST00000378512 FTOQ9C0B1 505 aaKnown RBP eCLIP19.36■□□□□ 0.694e-16■■□□□ 13.3
RER1-202ENST00000378512 PTPRSQ13332 1948 aa19.36■□□□□ 0.69
RER1-202ENST00000378512 DHX15O43143 795 aaKnown RBP19.35■□□□□ 0.69
RER1-202ENST00000378512 LGR5O75473 907 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 ATG7O95352 703 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 PFKMP08237 780 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 FDPSP14324 419 aaKnown RBP19.35■□□□□ 0.69
RER1-202ENST00000378512 IGFBP4P22692 258 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 USP11P51784 963 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 NLRP5P59047 1200 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 PTK7Q13308 1070 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 BFSP2Q13515 415 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 PPP2R2DQ66LE6 453 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 SPRED2Q7Z698 418 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 TRIM50Q86XT4 487 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 LENG9Q96B70 501 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 PHF20Q9BVI0 1012 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 CERS4Q9HA82 394 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 JPH1Q9HDC5 661 aaPredicted RBP19.35■□□□□ 0.69
RER1-202ENST00000378512 SLC9A2Q9UBY0 812 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 PCDHA11Q9Y5I1 949 aa19.35■□□□□ 0.69
RER1-202ENST00000378512 RFXAPO00287 272 aa19.34■□□□□ 0.69
RER1-202ENST00000378512 CA3P07451 260 aa19.34■□□□□ 0.69
RER1-202ENST00000378512 SMIM10L2AP0DMW4 78 aa19.34■□□□□ 0.69
RER1-202ENST00000378512 SMIM10L2BP0DMW5 78 aa19.34■□□□□ 0.69
RER1-202ENST00000378512 RFC2P35250 354 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms