RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 EVI5O60447 810 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 PSMD10O75832 226 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 SYT1P21579 422 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 PSEN2P49810 448 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 SP4Q02446 784 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 SLFN12Q8IYM2 578 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 FOXD4L1Q9NU39 408 aa14.97□□□□□ -0.01
CKAP2-202ENST00000378034 H3BRB1 525 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 LGR5O75473 907 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 ZNF286BP0CG31 522 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 SFNP31947 248 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 PSMC6P62333 389 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 MFSD10Q14728 455 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 NBPF20Q3BBV1 942 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 TRIM60Q495X7 471 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 BRAPQ7Z569 592 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 SESTD1Q86VW0 696 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 RDM1Q8NG50 284 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 SMARCAD1Q9H4L7 1026 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 TUT1Q9H6E5 874 aaKnown RBP14.96□□□□□ -0.01
CKAP2-202ENST00000378034 ATP11BQ9Y2G3 1177 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 NR2E3Q9Y5X4 410 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 DCDC2CA8MYV0 355 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 DDX39AO00148 427 aaKnown RBP14.96□□□□□ -0.01
CKAP2-202ENST00000378034 MARCH6O60337 910 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 NEMFO60524 1076 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 CCNE2O96020 404 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 KIAA0753Q2KHM9 967 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 RILPL1Q5EBL4 403 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 TTC38Q5R3I4 469 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 MIS18BP1Q6P0N0 1132 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 ABHD15Q6UXT9 468 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 AZI2Q9H6S1 392 aa14.96□□□□□ -0.01
CKAP2-202ENST00000378034 IGKV6D-21A0A0A0MT36 114 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 VPS37CA5D8V6 355 aaPredicted RBP14.95□□□□□ -0.02
CKAP2-202ENST00000378034 WDR64B1ANS9 1081 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 TLR3O15455 904 aaKnown RBP14.95□□□□□ -0.02
CKAP2-202ENST00000378034 SUPT20HL2P0C7V6 817 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 SLC26A2P50443 739 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 JAK3P52333 1124 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 TLE2Q04725 743 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 CALCRLQ16602 461 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 UTP14CQ5TAP6 766 aaKnown RBP14.95□□□□□ -0.02
CKAP2-202ENST00000378034 PLPPR4Q7Z2D5 763 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 HAS1Q92839 578 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 ERAP1Q9NZ08 941 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 TELO2Q9Y4R8 837 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 PCDHA10Q9Y5I2 948 aa14.95□□□□□ -0.02
CKAP2-202ENST00000378034 PSAPP07602 524 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 ATP2B1P20020 1258 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 FAM160B1Q5W0V3 765 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 B3GNT9Q6UX72 402 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 FAM126BQ8IXS8 530 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 C7orf31Q8N865 590 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 AFAP1L1Q8TED9 768 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 GLG1Q92896 1179 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 TNPO1Q92973 898 aaKnown RBP14.94□□□□□ -0.02
CKAP2-202ENST00000378034 UIMC1Q96RL1 719 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 STX6O43752 255 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 PQBP1O60828 265 aaKnown RBP14.94□□□□□ -0.02
CKAP2-202ENST00000378034 MCM7P33993 719 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 STAT5BP51692 787 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 PPP2R5CQ13362 524 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 MTMR9Q96QG7 549 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 UNC45AQ9H3U1 944 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 DISC1Q9NRI5 854 aa14.94□□□□□ -0.02
CKAP2-202ENST00000378034 WNT7AO00755 349 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 CD4P01730 458 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 TOB1P50616 345 aaPredicted RBP14.93□□□□□ -0.02
CKAP2-202ENST00000378034 ZNF174Q15697 407 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 FAM47CQ5HY64 1035 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 C7orf61Q8IZ16 206 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 PCYT2Q99447 389 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 ZNF302Q9NR11 478 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 VAV3Q9UKW4 847 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 SAMM50Q9Y512 469 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 LAD1O00515 517 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 BACH1O14867 736 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 CLTBP09497 229 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 MIER3Q7Z3K6 550 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 TRIM50Q86XT4 487 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 GJA10Q969M2 543 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 ZSCAN16Q9H4T2 348 aaPredicted RBP14.93□□□□□ -0.02
CKAP2-202ENST00000378034 HDAC6Q9UBN7 1215 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 GTF2IRD1Q9UHL9 959 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 PCDHA12Q9UN75 941 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 MTMR6Q9Y217 621 aa14.93□□□□□ -0.02
CKAP2-202ENST00000378034 GNAT1P11488 350 aa14.92□□□□□ -0.02
CKAP2-202ENST00000378034 CHMP4BP1P59074 171 aa14.92□□□□□ -0.02
CKAP2-202ENST00000378034 FAAP100Q0VG06 881 aa14.92□□□□□ -0.02
CKAP2-202ENST00000378034 SWSAP1Q6NVH7 229 aa14.92□□□□□ -0.02
CKAP2-202ENST00000378034 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.92□□□□□ -0.02
CKAP2-202ENST00000378034 PRKAG2Q9UGJ0 569 aa14.92□□□□□ -0.02
CKAP2-202ENST00000378034 MAFBQ9Y5Q3 323 aaPredicted RBP14.92□□□□□ -0.02
CKAP2-202ENST00000378034 CHMP2AO43633 222 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 OR52Z1P0C646 297 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 SMIM10L2AP0DMW4 78 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 SMIM10L2BP0DMW5 78 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 HOXC8P31273 242 aa14.91□□□□□ -0.02
CKAP2-202ENST00000378034 CCDC60Q8IWA6 550 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms