RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 RAD54LQ92698 747 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 BHMT2Q9H2M3 363 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 RGL1Q9NZL6 768 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 KCPQ6ZWJ8 1503 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 BCL9O00512 1426 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 ATRNO75882 1429 aa12.67□□□□□ -0.38
SEC23B-204ENST00000377475 PTK2Q05397 1052 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 ALKBH5Q6P6C2 394 aaKnown RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 TBC1D31Q96DN5 1066 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 HDAC9Q9UKV0 1011 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 A0A087WUV0 522 aaPredicted RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 GOLGA8KD6RF30 607 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 EIF3HO15372 352 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 SORBS3O60504 671 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 CFBP00751 764 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 CASP4P49662 377 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 MRPL12P52815 198 aaKnown RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 PLTPP55058 493 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 CTTNQ14247 550 aaKnown RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 FAM196AQ6ZSG2 479 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 CCDC121Q6ZUS5 278 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 OTUD6AQ7L8S5 288 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 ADGRF4Q8IZF3 695 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 MYCT1Q8N699 235 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 THOC1Q96FV9 657 aaKnown RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 CEP89Q96ST8 783 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 ADAM33Q9BZ11 813 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 PCIF1Q9H4Z3 704 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 ANO9A1A5B4 782 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 ZBTB39O15060 712 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 TRIM49P0CI25 452 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 TRIM49CP0CI26 452 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 XRCC5P13010 732 aaKnown RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 CASP5P51878 434 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 SF3B2Q13435 895 aaKnown RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 EXOC3L4Q17RC7 722 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 EFCAB13Q8IY85 973 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 AK8Q96MA6 479 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 TMOD4Q9NZQ9 345 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 THRAP3Q9Y2W1 955 aaKnown RBP12.66□□□□□ -0.38
SEC23B-204ENST00000377475 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
SEC23B-204ENST00000377475 PALM3A6NDB9 673 aaPredicted RBP12.65□□□□□ -0.38
SEC23B-204ENST00000377475 PHF20L1A8MW92 1017 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 TTI1O43156 1089 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 RPSAP08865 295 aaKnown RBP12.65□□□□□ -0.38
SEC23B-204ENST00000377475 GPSM2P81274 684 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 SP4Q02446 784 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
SEC23B-204ENST00000377475 GLYCTKQ8IVS8 523 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 C7orf25Q9BPX7 421 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 PAIP2Q9BPZ3 127 aaKnown RBP12.65□□□□□ -0.38
SEC23B-204ENST00000377475 NYXQ9GZU5 481 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 ZMYND12Q9H0C1 365 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 CD248Q9HCU0 757 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 GGA1Q9UJY5 639 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 TNS2Q63HR2 1409 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 VIMP08670 466 aaKnown RBP12.65□□□□□ -0.38
SEC23B-204ENST00000377475 MEA1Q16626 185 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 CYP2W1Q8TAV3 490 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 CUL5Q93034 780 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 CD209Q9NNX6 404 aa12.65□□□□□ -0.38
SEC23B-204ENST00000377475 FGGP02679 453 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 MYBP10242 640 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 LSP1P33241 339 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 ZC2HC1CQ53FD0 456 aaPredicted RBP12.65□□□□□ -0.39
SEC23B-204ENST00000377475 CENPPQ6IPU0 288 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 VPS36Q86VN1 386 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 KAT2BQ92831 832 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 MTA3Q9BTC8 594 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 FBXL5Q9UKA1 691 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 SIK3Q9Y2K2 1263 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 SNX24Q9Y343 169 aa12.65□□□□□ -0.39
SEC23B-204ENST00000377475 SPDYE3A6NKU9 549 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 SART1O43290 800 aaKnown RBP12.64□□□□□ -0.39
SEC23B-204ENST00000377475 TLR2O60603 784 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 PDHBP11177 359 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 MAGOHP61326 146 aaKnown RBP12.64□□□□□ -0.39
SEC23B-204ENST00000377475 SF3B3Q15393 1217 aaKnown RBP12.64□□□□□ -0.39
SEC23B-204ENST00000377475 TRAPPC3LQ5T215 181 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 AADACL2Q6P093 401 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 CCDC174Q6PII3 467 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 AENQ8WTP8 325 aaKnown RBP12.64□□□□□ -0.39
SEC23B-204ENST00000377475 GLG1Q92896 1179 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 MAGOHBQ96A72 148 aaKnown RBP12.64□□□□□ -0.39
SEC23B-204ENST00000377475 OSGEPQ9NPF4 335 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 GCNT4Q9P109 453 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 FLT1P17948 1338 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 PLEKHG2Q9H7P9 1386 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
SEC23B-204ENST00000377475 ZNF233A6NK53 670 aa12.64□□□□□ -0.39
SEC23B-204ENST00000377475 SERPING1P05155 500 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms