RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 LMBRD1Q9NUN5 540 aa23.97■■□□□ 1.43
CBWD3-202ENST00000377342 MCM4P33991 863 aa23.96■■□□□ 1.43
CBWD3-202ENST00000377342 SLC9C1Q4G0N8 1177 aa23.96■■□□□ 1.43
CBWD3-202ENST00000377342 TLK2Q86UE8 772 aa23.96■■□□□ 1.43
CBWD3-202ENST00000377342 RAB34Q9BZG1 259 aa23.96■■□□□ 1.43
CBWD3-202ENST00000377342 MLXIPQ9HAP2 919 aa23.96■■□□□ 1.43
CBWD3-202ENST00000377342 A0A1W2PQ27 194 aa23.95■■□□□ 1.43
CBWD3-202ENST00000377342 A0A1W2PQ64 194 aa23.95■■□□□ 1.43
CBWD3-202ENST00000377342 A0A1W2PQD8 194 aa23.95■■□□□ 1.43
CBWD3-202ENST00000377342 WDR64B1ANS9 1081 aa23.95■■□□□ 1.43
CBWD3-202ENST00000377342 CNGA1P29973 690 aa23.95■■□□□ 1.43
CBWD3-202ENST00000377342 OR6J1Q8NGC5 347 aa23.95■■□□□ 1.43
CBWD3-202ENST00000377342 GPR20Q99678 358 aa23.95■■□□□ 1.43
CBWD3-202ENST00000377342 PRDM10Q9NQV6 1147 aa23.95■■□□□ 1.43
CBWD3-202ENST00000377342 GSTTP1A0A1W2PQM5 241 aa23.95■■□□□ 1.42
CBWD3-202ENST00000377342 JAK3P52333 1124 aa23.95■■□□□ 1.42
CBWD3-202ENST00000377342 IRX5P78411 483 aaPredicted RBP23.95■■□□□ 1.42
CBWD3-202ENST00000377342 LAMC2Q13753 1193 aa23.95■■□□□ 1.42
CBWD3-202ENST00000377342 TPRNQ4KMQ1 711 aa23.95■■□□□ 1.42
CBWD3-202ENST00000377342 MIER3Q7Z3K6 550 aa23.95■■□□□ 1.42
CBWD3-202ENST00000377342 SMAP1Q8IYB5 467 aaPredicted RBP23.95■■□□□ 1.42
CBWD3-202ENST00000377342 SPATA33Q96N06 139 aa23.95■■□□□ 1.42
CBWD3-202ENST00000377342 GOLPH3LQ9H4A5 285 aa23.95■■□□□ 1.42
CBWD3-202ENST00000377342 DISC1Q9NRI5 854 aa23.95■■□□□ 1.42
CBWD3-202ENST00000377342 DUSP11O75319 330 aaKnown RBP23.94■■□□□ 1.42
CBWD3-202ENST00000377342 ATG7O95352 703 aa23.94■■□□□ 1.42
CBWD3-202ENST00000377342 CMA1P23946 247 aa23.94■■□□□ 1.42
CBWD3-202ENST00000377342 PKN2Q16513 984 aaKnown RBP23.94■■□□□ 1.42
CBWD3-202ENST00000377342 ABHD15Q6UXT9 468 aa23.94■■□□□ 1.42
CBWD3-202ENST00000377342 PPTC7Q8NI37 304 aa23.94■■□□□ 1.42
CBWD3-202ENST00000377342 AFG1LQ8WV93 481 aa23.94■■□□□ 1.42
CBWD3-202ENST00000377342 TCEAL9Q9UHQ7 104 aa23.94■■□□□ 1.42
CBWD3-202ENST00000377342 SYNRGQ9UMZ2 1314 aa23.94■■□□□ 1.42
CBWD3-202ENST00000377342 ARID2Q68CP9 1835 aa23.94■■□□□ 1.42
CBWD3-202ENST00000377342 CTAGE5O15320 804 aa23.93■■□□□ 1.42
CBWD3-202ENST00000377342 SFNP31947 248 aa23.93■■□□□ 1.42
CBWD3-202ENST00000377342 EPHA7Q15375 998 aa23.93■■□□□ 1.42
CBWD3-202ENST00000377342 CCDC60Q8IWA6 550 aaPredicted RBP23.93■■□□□ 1.42
CBWD3-202ENST00000377342 RDM1Q8NG50 284 aa23.93■■□□□ 1.42
CBWD3-202ENST00000377342 SNX29Q8TEQ0 813 aa23.93■■□□□ 1.42
CBWD3-202ENST00000377342 EIF2AK1Q9BQI3 630 aaKnown RBP23.93■■□□□ 1.42
CBWD3-202ENST00000377342 HMX1Q9NP08 348 aaPredicted RBP23.93■■□□□ 1.42
CBWD3-202ENST00000377342 DDX20Q9UHI6 824 aaKnown RBP23.93■■□□□ 1.42
CBWD3-202ENST00000377342 Q9Y3F1 56 aa23.93■■□□□ 1.42
CBWD3-202ENST00000377342 A0A087X0B3 334 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 FAM237AA0A1B0GTK4 181 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 GOLGA6L22H0YM25 854 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 DYNC1LI2O43237 492 aaPredicted RBP23.92■■□□□ 1.42
CBWD3-202ENST00000377342 MED24O75448 989 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 SUPT20HL2P0C7V6 817 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 SPATA31C1P0DKV0 1188 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 UBE2HP62256 183 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 UGCGQ16739 394 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 FSIP1Q8NA03 581 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 PCYT2Q99447 389 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 HSD17B14Q9BPX1 270 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 CCSER1Q9C0I3 900 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 UNC93B1Q9H1C4 597 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 UPF3AQ9H1J1 476 aaKnown RBP23.92■■□□□ 1.42
CBWD3-202ENST00000377342 RGL1Q9NZL6 768 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 WRAP73Q9P2S5 460 aaPredicted RBP23.92■■□□□ 1.42
CBWD3-202ENST00000377342 LOXHD1Q8IVV2 1947 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 IGKV6D-21A0A0A0MT36 114 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 A0A1B0GVL5 298 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 MYADML2A6NDP7 307 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 MMP3P08254 477 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 HOXD8P13378 290 aaPredicted RBP23.92■■□□□ 1.42
CBWD3-202ENST00000377342 PFKFB1P16118 471 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 TCF7P36402 384 aaPredicted RBP23.92■■□□□ 1.42
CBWD3-202ENST00000377342 CYP4A11Q02928 519 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 MTFR1Q15390 333 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 ECM1Q16610 540 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 CABP7Q86V35 215 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 LRRC15Q8TF66 581 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 MRPS27Q92552 414 aaKnown RBP23.92■■□□□ 1.42
CBWD3-202ENST00000377342 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.92■■□□□ 1.42
CBWD3-202ENST00000377342 HPSEQ9Y251 543 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 SAMM50Q9Y512 469 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 PCDHA10Q9Y5I2 948 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 IGSF9BQ9UPX0 1349 aa23.92■■□□□ 1.42
CBWD3-202ENST00000377342 NOP56O00567 594 aaKnown RBP23.91■■□□□ 1.42
CBWD3-202ENST00000377342 RARBP10826 455 aa23.91■■□□□ 1.42
CBWD3-202ENST00000377342 GJA9P57773 515 aa23.91■■□□□ 1.42
CBWD3-202ENST00000377342 GRB10Q13322 594 aa23.91■■□□□ 1.42
CBWD3-202ENST00000377342 KARSQ15046 597 aaKnown RBP23.91■■□□□ 1.42
CBWD3-202ENST00000377342 HAUS3Q68CZ6 603 aa23.91■■□□□ 1.42
CBWD3-202ENST00000377342 CATSPER3Q86XQ3 398 aa23.91■■□□□ 1.42
CBWD3-202ENST00000377342 BANK1Q8NDB2 785 aa23.91■■□□□ 1.42
CBWD3-202ENST00000377342 DYDC2Q96IM9 177 aa23.91■■□□□ 1.42
CBWD3-202ENST00000377342 PNMA5Q96PV4 448 aa23.91■■□□□ 1.42
CBWD3-202ENST00000377342 POTEB3A0JP26 581 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 GOLGA6L4A6NEF3 574 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 A6NJR5 290 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 ADAMTS4O75173 837 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 UBA7P41226 1012 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 NKX3-2P78367 333 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 HYIQ5T013 277 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 KRT79Q5XKE5 535 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 MIS18BP1Q6P0N0 1132 aa23.9■■□□□ 1.42
CBWD3-202ENST00000377342 POTEBQ6S5H4 581 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms