RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 UBIAD1Q9Y5Z9 338 aa14.38□□□□□ -0.11
TRIM40-206ENST00000376724 TESPA1A2RU30 521 aaPredicted RBP14.37□□□□□ -0.11
TRIM40-206ENST00000376724 PES1O00541 588 aaKnown RBP14.37□□□□□ -0.11
TRIM40-206ENST00000376724 ZBTB39O15060 712 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 COPB1P53618 953 aaKnown RBP14.37□□□□□ -0.11
TRIM40-206ENST00000376724 EHHADHQ08426 723 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 FAM26FQ5R3K3 315 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 ANKRD13AQ8IZ07 590 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
TRIM40-206ENST00000376724 ZC3H15Q8WU90 426 aaKnown RBP14.37□□□□□ -0.11
TRIM40-206ENST00000376724 PDCD2LQ9BRP1 358 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 THAP9Q9H5L6 903 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 POLD4Q9HCU8 107 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 TUFT1Q9NNX1 390 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 JADE2Q9NQC1 790 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 OTOFQ9HC10 1997 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 BCRP11274 1271 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 COBLL1Q53SF7 1204 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 BANK1Q8NDB2 785 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 RIT2Q99578 217 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 FGFBP2Q9BYJ0 223 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 TAF1DQ9H5J8 278 aaPredicted RBP14.37□□□□□ -0.11
TRIM40-206ENST00000376724 AGO4Q9HCK5 861 aaKnown RBP14.37□□□□□ -0.11
TRIM40-206ENST00000376724 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 SAMM50Q9Y512 469 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 WDR90Q96KV7 1748 aa14.37□□□□□ -0.11
TRIM40-206ENST00000376724 LRRC10BA6NIK2 292 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 EYA4O95677 639 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 ADKP55263 362 aaKnown RBP14.36□□□□□ -0.11
TRIM40-206ENST00000376724 ITGB3BPQ13352 177 aaPredicted RBP14.36□□□□□ -0.11
TRIM40-206ENST00000376724 GIT2Q14161 759 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 MIER3Q7Z3K6 550 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 ERO1BQ86YB8 467 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 MYOCDQ8IZQ8 938 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 GUF1Q8N442 669 aaKnown RBP14.36□□□□□ -0.11
TRIM40-206ENST00000376724 CPLX3Q8WVH0 158 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 REEP2Q9BRK0 252 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 RUSC1Q9BVN2 902 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 SPTLC3Q9NUV7 552 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 WRAP73Q9P2S5 460 aaPredicted RBP14.36□□□□□ -0.11
TRIM40-206ENST00000376724 RBBP6Q7Z6E9 1792 aaKnown RBP14.36□□□□□ -0.11
TRIM40-206ENST00000376724 FRMPD4Q14CM0 1322 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 ATP2A1O14983 1001 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 OFD1O75665 1012 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 PPATQ06203 517 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 TBX2Q13207 712 aaPredicted RBP14.36□□□□□ -0.11
TRIM40-206ENST00000376724 EPHA7Q15375 998 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 CENPPQ6IPU0 288 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 NIPA1Q7RTP0 329 aa14.36□□□□□ -0.11
TRIM40-206ENST00000376724 NOC3LQ8WTT2 800 aaKnown RBP14.36□□□□□ -0.11
TRIM40-206ENST00000376724 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
TRIM40-206ENST00000376724 DHX15O43143 795 aaKnown RBP14.35□□□□□ -0.11
TRIM40-206ENST00000376724 NRDCO43847 1150 aa14.35□□□□□ -0.11
TRIM40-206ENST00000376724 NR3C2P08235 984 aa14.35□□□□□ -0.11
TRIM40-206ENST00000376724 EEF1GP26641 437 aaKnown RBP14.35□□□□□ -0.11
TRIM40-206ENST00000376724 UBXN1Q04323 297 aa14.35□□□□□ -0.11
TRIM40-206ENST00000376724 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.35□□□□□ -0.11
TRIM40-206ENST00000376724 NELFCDQ8IXH7 590 aa14.35□□□□□ -0.11
TRIM40-206ENST00000376724 LXNQ9BS40 222 aa14.35□□□□□ -0.11
TRIM40-206ENST00000376724 ZNF408Q9H9D4 720 aa14.35□□□□□ -0.11
TRIM40-206ENST00000376724 CYP39A1Q9NYL5 469 aa14.35□□□□□ -0.11
TRIM40-206ENST00000376724 MYPNQ86TC9 1320 aa14.35□□□□□ -0.11
TRIM40-206ENST00000376724 A0A0G2JLL6 359 aaPredicted RBP14.34□□□□□ -0.11
TRIM40-206ENST00000376724 IQCA1LA6NCM1 817 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 RSPH10B2B2RC85 870 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 GRIN3BO60391 1043 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 ATP9AO75110 1047 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 RSPH10BP0C881 870 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 CCND2P30279 289 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
TRIM40-206ENST00000376724 CEP135Q66GS9 1140 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 PRRT2Q7Z6L0 340 aaPredicted RBP14.34□□□□□ -0.11
TRIM40-206ENST00000376724 PPFIBP1Q86W92 1011 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 NSUN6Q8TEA1 469 aaKnown RBP14.34□□□□□ -0.11
TRIM40-206ENST00000376724 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 CNOT6LQ96LI5 555 aaKnown RBP14.34□□□□□ -0.11
TRIM40-206ENST00000376724 BTBD7Q9P203 1132 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 PCDHA2Q9Y5H9 948 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 SFI1A8K8P3 1242 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 POTEJP0CG39 1038 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 PBX1P40424 430 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 MTIF2P46199 727 aaKnown RBP14.34□□□□□ -0.11
TRIM40-206ENST00000376724 RBL2Q08999 1139 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 RINT1Q6NUQ1 792 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 TRMT1LQ7Z2T5 733 aaKnown RBP14.34□□□□□ -0.11
TRIM40-206ENST00000376724 ARMC9Q7Z3E5 817 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 VSIG10LQ86VR7 867 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 FAM114A1Q8IWE2 563 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 NACC1Q96RE7 527 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 TSG101Q99816 390 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 TUBGCP2Q9BSJ2 902 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 PAGR1Q9BTK6 254 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 BCAS3Q9H6U6 928 aa14.34□□□□□ -0.11
TRIM40-206ENST00000376724 TRMT1Q9NXH9 659 aaKnown RBP14.34□□□□□ -0.11
TRIM40-206ENST00000376724 FRMD3A2A2Y4 597 aa14.33□□□□□ -0.12
TRIM40-206ENST00000376724 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms