RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 MED24O75448 989 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 CXCR5P32302 372 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 SLC16A2P36021 539 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 PAFAH1B1P43034 410 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 IRX3P78415 501 aaPredicted RBP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 Q4G0T1 1027 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 CFAP221Q4G0U5 840 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 SLFN12Q8IYM2 578 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 DNAJC18Q9H819 358 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 USP40Q9NVE5 1235 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 EHD2Q9NZN4 543 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 TMEM59LQ9UK28 342 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 POTEB3A0JP26 581 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 POTECB2RU33 542 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 GOLGA8KD6RF30 607 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 PPFIA4O75335 1185 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 HOXD13P35453 343 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 MMP14P50281 582 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 POLR2FP61218 127 aaKnown RBP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 AP3B2Q13367 1082 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 C10orf76Q5T2E6 689 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 POTEBQ6S5H4 581 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 KCTD1Q719H9 257 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 FRMD5Q7Z6J6 570 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 GPBP1Q86WP2 473 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 DCAF4Q8WV16 495 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 DRC1Q96MC2 740 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 GDAP1L1Q96MZ0 367 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 NLRC4Q9NPP4 1024 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 RBBP6Q7Z6E9 1792 aaKnown RBP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 A0A087X0T9 212 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 NPHP3-ACAD11A0A0J9YXS1 232 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 BHMG1C9JSJ3 638 aaPredicted RBP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 C6orf229H3BNL8 230 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 BUB1O43683 1085 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 FAM228BP0C875 321 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 ZBTB48P10074 688 aaPredicted RBP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 MYBP10242 640 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 KLRC1P26715 233 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 GIT2Q14161 759 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 EMC10Q5UCC4 262 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 MCTP2Q6DN12 878 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 SND1Q7KZF4 910 aaKnown RBP eCLIP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 IRF2BP2Q7Z5L9 587 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 MREGQ8N565 214 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 ANKRD13CQ8N6S4 541 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 GOLGA6L1Q8N7Z2 621 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 ANO3Q9BYT9 981 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 DHX36Q9H2U1 1008 aaKnown RBP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 LUC7LQ9NQ29 371 aaKnown RBP11.75□□□□□ -0.53
ABCF1-202ENST00000376545 SMARCAL1Q9NZC9 954 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 NYAP2Q9P242 653 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 FBXL5Q9UKA1 691 aa11.75□□□□□ -0.53
ABCF1-202ENST00000376545 PPEF1O14829 653 aaPredicted RBP11.74□□□□□ -0.53
ABCF1-202ENST00000376545 PALMO75781 387 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 BRD2P25440 801 aaKnown RBP11.74□□□□□ -0.53
ABCF1-202ENST00000376545 SLC7A5Q01650 507 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 ADAM9Q13443 819 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 BMT2Q1RMZ1 405 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 CCDC181Q5TID7 509 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 SYT2Q8N9I0 419 aaPredicted RBP11.74□□□□□ -0.53
ABCF1-202ENST00000376545 TSEN2Q8NCE0 465 aaKnown RBP11.74□□□□□ -0.53
ABCF1-202ENST00000376545 LENG9Q96B70 501 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 P2RX7Q99572 595 aaKnown RBP11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP21Q9UK80 565 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 TOM1O60784 492 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 KCNH2Q12809 1159 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 HERC4Q5GLZ8 1057 aaPredicted RBP11.74□□□□□ -0.53
ABCF1-202ENST00000376545 USP17L6PQ6QN14 398 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 CATSPER3Q86XQ3 398 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 SIAH1Q8IUQ4 282 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 FAM76AQ8TAV0 307 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 TBC1D5Q92609 795 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 MS4A14Q96JA4 679 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
ABCF1-202ENST00000376545 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
ABCF1-202ENST00000376545 ERCC3P19447 782 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 RPA1P27694 616 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 PRKCIP41743 596 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 SKOR1P84550 965 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 APBA1Q02410 837 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 PPFIA1Q13136 1202 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 TDRD12Q587J7 1177 aaKnown RBP11.73□□□□□ -0.53
ABCF1-202ENST00000376545 C8orf74Q6P047 294 aa11.73□□□□□ -0.53
ABCF1-202ENST00000376545 GBP6Q6ZN66 633 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms