RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 GPCPD1Q9NPB8 672 aa20.45■□□□□ 0.86
H2AFX-201ENST00000375167 RCAN3Q9UKA8 241 aa20.45■□□□□ 0.86
H2AFX-201ENST00000375167 FRMPD2Q68DX3 1309 aaPredicted RBP20.44■□□□□ 0.86
H2AFX-201ENST00000375167 C2CD4DB7Z1M9 353 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 ENPP3O14638 875 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 GHRP10912 638 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 GNAT1P11488 350 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 UBE3AQ05086 875 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 COL9A2Q14055 689 aaPredicted RBP20.44■□□□□ 0.86
H2AFX-201ENST00000375167 FAM26DQ5JW98 314 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 TMEM184AQ6ZMB5 413 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 ITPRIPQ8IWB1 547 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 C16orf70Q9BSU1 422 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 NACAP1Q9BZK3 213 aa20.44■□□□□ 0.86
H2AFX-201ENST00000375167 GPAA1O43292 621 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 NMT2O60551 498 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 PPFIA3O75145 1194 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 HOXB8P17481 243 aaPredicted RBP20.43■□□□□ 0.86
H2AFX-201ENST00000375167 SDHBP21912 280 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 HSDL1Q3SXM5 330 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 PAN2Q504Q3 1202 aaKnown RBP20.43■□□□□ 0.86
H2AFX-201ENST00000375167 APPBP2Q92624 585 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 TAAR1Q96RJ0 339 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 MAF1Q9H063 256 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 RNPEPQ9H4A4 650 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 IL17RBQ9NRM6 502 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 R4GN57 208 aa20.43■□□□□ 0.86
H2AFX-201ENST00000375167 H3BRB1 525 aa20.42■□□□□ 0.86
H2AFX-201ENST00000375167 EIF3JO75822 258 aaKnown RBP20.42■□□□□ 0.86
H2AFX-201ENST00000375167 USH1GQ495M9 461 aa20.42■□□□□ 0.86
H2AFX-201ENST00000375167 MYSM1Q5VVJ2 828 aa20.42■□□□□ 0.86
H2AFX-201ENST00000375167 SYCE2Q6PIF2 218 aa20.42■□□□□ 0.86
H2AFX-201ENST00000375167 ZC3H14Q6PJT7 736 aaKnown RBP20.42■□□□□ 0.86
H2AFX-201ENST00000375167 FTSJ3Q8IY81 847 aaKnown RBP20.42■□□□□ 0.86
H2AFX-201ENST00000375167 IFNL3Q8IZI9 196 aa20.42■□□□□ 0.86
H2AFX-201ENST00000375167 OSBP2Q969R2 916 aa20.42■□□□□ 0.86
H2AFX-201ENST00000375167 NECTIN4Q96NY8 510 aa20.42■□□□□ 0.86
H2AFX-201ENST00000375167 TUT1Q9H6E5 874 aaKnown RBP20.42■□□□□ 0.86
H2AFX-201ENST00000375167 PI15O43692 258 aa20.41■□□□□ 0.86
H2AFX-201ENST00000375167 SORBS3O60504 671 aa20.41■□□□□ 0.86
H2AFX-201ENST00000375167 ASGR2P07307 311 aa20.41■□□□□ 0.86
H2AFX-201ENST00000375167 KIAA0319Q5VV43 1072 aa20.41■□□□□ 0.86
H2AFX-201ENST00000375167 PDE12Q6L8Q7 609 aaKnown RBP20.41■□□□□ 0.86
H2AFX-201ENST00000375167 SYTL5Q8TDW5 730 aaPredicted RBP20.41■□□□□ 0.86
H2AFX-201ENST00000375167 CCDC171Q6TFL3 1326 aa20.41■□□□□ 0.86
H2AFX-201ENST00000375167 PPARAQ07869 468 aa20.4■□□□□ 0.86
H2AFX-201ENST00000375167 CELF3Q5SZQ8 465 aaKnown RBP20.4■□□□□ 0.86
H2AFX-201ENST00000375167 ARHGEF16Q5VV41 709 aa20.4■□□□□ 0.86
H2AFX-201ENST00000375167 CES5AQ6NT32 575 aa20.4■□□□□ 0.86
H2AFX-201ENST00000375167 TDRD5Q8NAT2 981 aaKnown RBP20.4■□□□□ 0.86
H2AFX-201ENST00000375167 POMKQ9H5K3 350 aa20.4■□□□□ 0.86
H2AFX-201ENST00000375167 PCDHB12Q9Y5F1 795 aa20.4■□□□□ 0.86
H2AFX-201ENST00000375167 FAM208BQ5VWN6 2430 aa20.39■□□□□ 0.86
H2AFX-201ENST00000375167 PATL2C9JE40 543 aaKnown RBP20.39■□□□□ 0.85
H2AFX-201ENST00000375167 GGPS1O95749 300 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 EIF2AK2P19525 551 aaKnown RBP20.39■□□□□ 0.85
H2AFX-201ENST00000375167 TPRNQ4KMQ1 711 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 LLGL2Q6P1M3 1020 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 KCNV1Q6PIU1 500 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 NPAS4Q8IUM7 802 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 NAPBQ9H115 298 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 EHMT1Q9H9B1 1298 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 SETD4Q9NVD3 440 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 COL20A1Q9P218 1284 aa20.39■□□□□ 0.85
H2AFX-201ENST00000375167 FRYLO94915 3013 aa20.38■□□□□ 0.85
H2AFX-201ENST00000375167 CHRNA1P02708 482 aa20.38■□□□□ 0.85
H2AFX-201ENST00000375167 MS4A1P11836 297 aa20.38■□□□□ 0.85
H2AFX-201ENST00000375167 KCNC3Q14003 757 aa20.38■□□□□ 0.85
H2AFX-201ENST00000375167 LPIN1Q14693 890 aa20.38■□□□□ 0.85
H2AFX-201ENST00000375167 RASGRP4Q8TDF6 673 aa20.38■□□□□ 0.85
H2AFX-201ENST00000375167 LGALS2P05162 132 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 NR3C2P08235 984 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 STAG3L1P0CL83 205 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 RLBP1P12271 317 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 NPR3P17342 541 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 MCF2L2Q86YR7 1114 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 ZDHHC14Q8IZN3 488 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 DCLK2Q8N568 766 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 CHAMP1Q96JM3 812 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 AAASQ9NRG9 546 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 KAT6AQ92794 2004 aa20.37■□□□□ 0.85
H2AFX-201ENST00000375167 FANCMQ8IYD8 2048 aa20.36■□□□□ 0.85
H2AFX-201ENST00000375167 TOP1P11387 765 aaKnown RBP20.36■□□□□ 0.85
H2AFX-201ENST00000375167 NOVP48745 357 aa20.36■□□□□ 0.85
H2AFX-201ENST00000375167 ARHGAP4P98171 946 aa20.36■□□□□ 0.85
H2AFX-201ENST00000375167 ITIH3Q06033 890 aa20.36■□□□□ 0.85
H2AFX-201ENST00000375167 SPOUT1Q5T280 376 aaKnown RBP20.36■□□□□ 0.85
H2AFX-201ENST00000375167 LIMD1Q9UGP4 676 aa20.36■□□□□ 0.85
H2AFX-201ENST00000375167 CDH22Q9UJ99 828 aa20.36■□□□□ 0.85
H2AFX-201ENST00000375167 FBXL21Q9UKT6 434 aa20.36■□□□□ 0.85
H2AFX-201ENST00000375167 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.36■□□□□ 0.85
H2AFX-201ENST00000375167 ABCB11O95342 1321 aa20.36■□□□□ 0.85
H2AFX-201ENST00000375167 RANBP6O60518 1105 aaKnown RBP20.35■□□□□ 0.85
H2AFX-201ENST00000375167 MTHFRP42898 656 aa20.35■□□□□ 0.85
H2AFX-201ENST00000375167 ERVFC1P60507 584 aa20.35■□□□□ 0.85
H2AFX-201ENST00000375167 PLPP4Q5VZY2 271 aa20.35■□□□□ 0.85
H2AFX-201ENST00000375167 RSPH3Q86UC2 560 aa20.35■□□□□ 0.85
H2AFX-201ENST00000375167 PLCD3Q8N3E9 789 aa20.35■□□□□ 0.85
H2AFX-201ENST00000375167 TBC1D5Q92609 795 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms