RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 FOXK2Q01167 660 aa17.19■□□□□ 0.34
CDKN1A-202ENST00000373711 TAF2Q6P1X5 1199 aa17.19■□□□□ 0.34
CDKN1A-202ENST00000373711 METTL7BQ6UX53 244 aa17.19■□□□□ 0.34
CDKN1A-202ENST00000373711 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
CDKN1A-202ENST00000373711 PCDHA1Q9Y5I3 950 aa17.19■□□□□ 0.34
CDKN1A-202ENST00000373711 ZDBF2Q9HCK1 2354 aa17.19■□□□□ 0.34
CDKN1A-202ENST00000373711 NRCAMQ92823 1304 aa17.19■□□□□ 0.34
CDKN1A-202ENST00000373711 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 ZBTB5O15062 677 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 RPLP2P05387 115 aaKnown RBP17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 ZXDAP98168 799 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 ARHGAP4P98171 946 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 SP2Q02086 613 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 ADAM15Q13444 863 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 FBXL6Q8N531 539 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 SETD4Q9NVD3 440 aa17.18■□□□□ 0.34
CDKN1A-202ENST00000373711 OPLAHO14841 1288 aa17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 NMIQ13287 307 aaPredicted RBP17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 AAMPQ13685 434 aa17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 USP34Q70CQ2 3546 aa17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 EFHBQ8N7U6 833 aa17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 ENAHQ8N8S7 591 aaPredicted RBP17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 SMRP1Q8NCR6 262 aa17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 MSLNLQ96KJ4 702 aa17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 PHOX2BQ99453 314 aa17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 KRT23Q9C075 422 aa17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 RC3H2Q9HBD1 1191 aaKnown RBP17.17■□□□□ 0.34
CDKN1A-202ENST00000373711 LOC730098B7Z3J9 87 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 GFRA3O60609 400 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 CSPG5O95196 566 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 LINC00271P0C7V0 271 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 GHRP10912 638 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 HOXA13P31271 388 aaPredicted RBP17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 ICAM3P32942 547 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 PDE1AP54750 535 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 SIGLEC14Q08ET2 396 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 COASYQ13057 564 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 CMTR2Q8IYT2 770 aaKnown RBP17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 IL31RAQ8NI17 732 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 LMBR1Q8WVP7 490 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 ZNF689Q96CS4 500 aaPredicted RBP17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 GPR20Q99678 358 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 PLAGL2Q9UPG8 496 aa17.16■□□□□ 0.34
CDKN1A-202ENST00000373711 B4E1Z4 1266 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 KLRF2D3W0D1 207 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 LINC01565O15544 149 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 FIBPO43427 364 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 GTF2F1P35269 517 aaKnown RBP eCLIP17.15■□□□□ 0.341e-5■□□□□ 9
CDKN1A-202ENST00000373711 NUBP1P53384 320 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 CBX2Q14781 532 aaPredicted RBP17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 IER5LQ5T953 404 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 CYFIP1Q7L576 1253 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 FCHSD1Q86WN1 690 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 GIMAP8Q8ND71 665 aaPredicted RBP17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 MTMR8Q96EF0 704 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 FTHL17Q9BXU8 183 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 EHMT1Q9H9B1 1298 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 ALG13Q9NP73 1137 aaKnown RBP17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
CDKN1A-202ENST00000373711 CACNA1HO95180 2353 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 LOXHD1Q8IVV2 1947 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 DGKIO75912 1065 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 CHRNA1P02708 482 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 STAG3L1P0CL83 205 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 ADAM17P78536 824 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 TCF15Q12870 199 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 IMMTQ16891 758 aaKnown RBP17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 UTP14CQ5TAP6 766 aaKnown RBP17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 TSHZ1Q6ZSZ6 1077 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 INPP4AQ96PE3 977 aaPredicted RBP17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 PHF7Q9BWX1 381 aaPredicted RBP17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 OSBPL7Q9BZF2 842 aa17.14■□□□□ 0.33
CDKN1A-202ENST00000373711 ENPP3O14638 875 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 SRGAP2BP0DMP2 458 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 LPIN1Q14693 890 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 TRIM50Q86XT4 487 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 HOMER1Q86YM7 354 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 GPKOWQ92917 476 aaPredicted RBP eCLIP17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 RILPL2Q969X0 211 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 SENP7Q9BQF6 1050 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 ZSWIM5Q9P217 1185 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 PLXNA4Q9HCM2 1894 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 BAZ2BQ9UIF8 2168 aaKnown RBP17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 FRMPD4Q14CM0 1322 aa17.13■□□□□ 0.33
CDKN1A-202ENST00000373711 CFAP54Q96N23 3096 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 SPATA31C2B4DYI2 1134 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 M0QZ92 97 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 ATF7P17544 494 aaPredicted RBP17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 NRIP1P48552 1158 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 MGAT3Q09327 533 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 PPFIA1Q13136 1202 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
CDKN1A-202ENST00000373711 XRRA1Q6P2D8 792 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms