RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 CYB5R4Q7L1T6 521 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 PNMA1Q8ND90 353 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 PDLIM2Q96JY6 352 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 PDE4DIPQ5VU43 2346 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 DCAF8L1A6NGE4 600 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 NLRP12P59046 1061 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 CETN1Q12798 172 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 SIX5Q8N196 739 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 ANKRD7Q92527 254 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 PSMB7Q99436 277 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 CACNA1SQ13698 1873 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 A0A1B0GVL5 298 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 VWA3AA6NCI4 1184 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 ECE2O60344 883 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 KCNA3P22001 575 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 SP8Q8IXZ3 490 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 PDZD8Q8NEN9 1154 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 DHX58Q96C10 678 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 LRRC27Q9C0I9 530 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 GSG1L2A8MUP6 293 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 EN1Q05925 392 aaPredicted RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 ZNF449Q6P9G9 518 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 PPP1R14BQ96C90 147 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 HAUS8Q9BT25 410 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 LY9Q9HBG7 655 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 ZFATQ9P243 1243 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 ZNF229Q9UJW7 825 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 ATP6V0A2Q9Y487 856 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 E9PMD0 336 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 DIAPH2O60879 1101 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 SLFN14P0C7P3 912 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 RSPH3Q86UC2 560 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 TTLL6Q8N841 843 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 TEKT4Q8WW24 435 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 GPKOWQ92917 476 aaPredicted RBP eCLIP7.14□□□□□ -1.276e-6■□□□□ 11.1
CHD6-203ENST00000373233 C10orf88Q9H8K7 445 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.14□□□□□ -1.273e-24■■■■□ 25.3
CHD6-203ENST00000373233 LTBP4Q8N2S1 1624 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 USP17L3A6NCW0 530 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 USP17L4A6NCW7 530 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 SART1O43290 800 aaKnown RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 RAD23BP54727 409 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 MRPS35P82673 323 aaKnown RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 USP17L1Q7RTZ2 530 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 VPS37BQ9H9H4 285 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 GID8Q9NWU2 228 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 COMMD10Q9Y6G5 202 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 LSM1O15116 133 aaKnown RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 SLC1A4P43007 532 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 INPP1P49441 399 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 PLCB4Q15147 1175 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 DALRD3Q5D0E6 543 aaKnown RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 FBXO33Q7Z6M2 555 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 NRBF2Q96F24 287 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 SUCLA2Q9P2R7 463 aaPredicted RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 KCNH3Q9ULD8 1083 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 FRMPD2Q68DX3 1309 aaPredicted RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 HNRNPH1P31943 449 aaKnown RBP7.14□□□□□ -1.27
CHD6-203ENST00000373233 KRT25Q7Z3Z0 450 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 BBOF1Q8ND07 529 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 CHMP2BQ9UQN3 213 aa7.14□□□□□ -1.27
CHD6-203ENST00000373233 ADCY3O60266 1144 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 SCG2P13521 617 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 IFNAR2P48551 515 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 MRPS9P82933 396 aaKnown RBP7.13□□□□□ -1.27
CHD6-203ENST00000373233 UBL4BQ8N7F7 174 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 LZICQ8WZA0 190 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 DAB1O75553 588 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 ZRANB2O95218 330 aaKnown RBP eCLIP7.13□□□□□ -1.271e-6■■■■□ 23.3
CHD6-203ENST00000373233 OMA1Q96E52 524 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 HIC2Q96JB3 615 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 SH3GL1Q99961 368 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 FBXO2Q9UK22 296 aaPredicted RBP7.13□□□□□ -1.27
CHD6-203ENST00000373233 TLK1Q9UKI8 766 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 SPAG7O75391 227 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 HARSP12081 509 aaKnown RBP7.13□□□□□ -1.27
CHD6-203ENST00000373233 GJC1P36383 396 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 NLRP7Q8WX94 980 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.13□□□□□ -1.275e-7■■□□□ 13.2
CHD6-203ENST00000373233 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHD6-203ENST00000373233 FTOQ9C0B1 505 aaKnown RBP eCLIP7.13□□□□□ -1.271e-6■■■□□ 17.1
CHD6-203ENST00000373233 C4BP0C0L5 1744 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 E2F6O75461 281 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 GRAMD1BQ3KR37 738 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 FAM43BQ6ZT52 329 aaPredicted RBP7.13□□□□□ -1.27
CHD6-203ENST00000373233 KIFAP3Q92845 792 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 STAMBPL1Q96FJ0 436 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 PDP2Q9P2J9 529 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 STOML1Q9UBI4 398 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 CDC23Q9UJX2 597 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 GMEB1Q9Y692 573 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 CFAP73A6NFT4 308 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 EXOSC10Q01780 885 aaKnown RBP7.13□□□□□ -1.27
CHD6-203ENST00000373233 PTF1AQ7RTS3 328 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 DCP1AQ9NPI6 582 aaPredicted RBP7.13□□□□□ -1.27
CHD6-203ENST00000373233 PICK1Q9NRD5 415 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 SCHIP1Q9P0W5 487 aaPredicted RBP7.13□□□□□ -1.27
CHD6-203ENST00000373233 CASZ1Q86V15 1759 aa7.13□□□□□ -1.27
CHD6-203ENST00000373233 TBCAO75347 108 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms