RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 TCP10Q12799 353 aa18.41■□□□□ 0.54
PCIF1-201ENST00000372409 CFAP221Q4G0U5 840 aa18.41■□□□□ 0.54
PCIF1-201ENST00000372409 RNF10Q8N5U6 811 aaKnown RBP18.41■□□□□ 0.54
PCIF1-201ENST00000372409 FAM76AQ8TAV0 307 aa18.41■□□□□ 0.54
PCIF1-201ENST00000372409 ANO3Q9BYT9 981 aa18.41■□□□□ 0.54
PCIF1-201ENST00000372409 ADAMTS1Q9UHI8 967 aa18.41■□□□□ 0.54
PCIF1-201ENST00000372409 PACSIN2Q9UNF0 486 aaPredicted RBP18.41■□□□□ 0.54
PCIF1-201ENST00000372409 LY75O60449 1722 aa18.41■□□□□ 0.54
PCIF1-201ENST00000372409 MEIS1O00470 390 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 TRIM66O15016 1216 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 CACNB3P54284 484 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 RNASE9P60153 205 aaKnown RBP18.4■□□□□ 0.54
PCIF1-201ENST00000372409 SNAP25P60880 206 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 SHROOM1Q2M3G4 852 aaPredicted RBP18.4■□□□□ 0.54
PCIF1-201ENST00000372409 HYIQ5T013 277 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 SRLQ86TD4 932 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 CRAMP1Q96RY5 1269 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 ATF5Q9Y2D1 282 aaPredicted RBP18.4■□□□□ 0.54
PCIF1-201ENST00000372409 PCDHA2Q9Y5H9 948 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 MYH4Q9Y623 1939 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 KLRC1P26715 233 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 HOXA10P31260 410 aaPredicted RBP18.4■□□□□ 0.54
PCIF1-201ENST00000372409 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 FOXR2Q6PJQ5 311 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 ZFPM1Q8IX07 1006 aa18.4■□□□□ 0.54
PCIF1-201ENST00000372409 NAP1L4Q99733 375 aaKnown RBP18.4■□□□□ 0.54
PCIF1-201ENST00000372409 FEZ2Q9UHY8 353 aaPredicted RBP18.4■□□□□ 0.54
PCIF1-201ENST00000372409 A0A087X0T9 212 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 CETN3O15182 167 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 RPS6KA5O75582 802 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 FAM228BP0C875 321 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 NR2F2P24468 414 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 EPHB4P54760 987 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 ASIC2Q16515 512 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 PRR16Q569H4 304 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 KCTD10Q9H3F6 313 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 LTBP4Q8N2S1 1624 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 RBAK-RBAKDNI3L0D1 243 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 KCNH2Q12809 1159 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 CDC37Q16543 378 aaPredicted RBP18.39■□□□□ 0.53
PCIF1-201ENST00000372409 SYN2Q92777 582 aaPredicted RBP18.39■□□□□ 0.53
PCIF1-201ENST00000372409 RUFY1Q96T51 708 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 PACSIN1Q9BY11 444 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 TSKSQ9UJT2 592 aa18.39■□□□□ 0.53
PCIF1-201ENST00000372409 ARFGEF1Q9Y6D6 1849 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 ACTN1P12814 892 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 EEF2P13639 858 aaKnown RBP18.38■□□□□ 0.53
PCIF1-201ENST00000372409 CASP5P51878 434 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.53
PCIF1-201ENST00000372409 SLC18A3Q16572 532 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 SP8Q8IXZ3 490 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 TEKT1Q969V4 418 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
PCIF1-201ENST00000372409 NAB2Q15742 525 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 USH1GQ495M9 461 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 ARSHQ5FYA8 562 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 KCNMB3Q9NPA1 279 aa18.38■□□□□ 0.53
PCIF1-201ENST00000372409 PSMC6P62333 389 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 SLFN13Q68D06 897 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 ARHGAP27Q6ZUM4 889 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 TSEN2Q8NCE0 465 aaKnown RBP18.37■□□□□ 0.53
PCIF1-201ENST00000372409 IFT81Q8WYA0 676 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 DHX36Q9H2U1 1008 aaKnown RBP18.37■□□□□ 0.53
PCIF1-201ENST00000372409 POLD4Q9HCU8 107 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 HDAC9Q9UKV0 1011 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 SUGT1Q9Y2Z0 365 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 ESYT3A0FGR9 886 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 USP11P51784 963 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 SLC12A3P55017 1021 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 CATSPER3Q86XQ3 398 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 SLFN12Q8IYM2 578 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 RUBCNQ92622 972 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 MYO3BQ8WXR4 1341 aa18.37■□□□□ 0.53
PCIF1-201ENST00000372409 ZSCAN5CA6NGD5 496 aaPredicted RBP18.36■□□□□ 0.53
PCIF1-201ENST00000372409 POLRMTO00411 1230 aaKnown RBP18.36■□□□□ 0.53
PCIF1-201ENST00000372409 HSF2BPO75031 334 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 ARHGAP4P98171 946 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 DNAJC21Q5F1R6 531 aaKnown RBP18.36■□□□□ 0.53
PCIF1-201ENST00000372409 DCAF17Q5H9S7 520 aaPredicted RBP18.36■□□□□ 0.53
PCIF1-201ENST00000372409 APOBEC3HQ6NTF7 200 aaKnown RBP18.36■□□□□ 0.53
PCIF1-201ENST00000372409 SPAG5Q96R06 1193 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 TSPYL1Q9H0U9 437 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 GLT8D2Q9H1C3 349 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 ADAMTSL1Q8N6G6 1762 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 ANKRD65E5RJM6 399 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 SLC9A1P19634 815 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 RBM5P52756 815 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCIF1-201ENST00000372409 MARSP56192 900 aaKnown RBP18.36■□□□□ 0.53
PCIF1-201ENST00000372409 GUCY2DQ02846 1103 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 TCERG1LQ5VWI1 586 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 EMBQ6PCB8 327 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 EPB41L5Q9HCM4 733 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 HEXIM1O94992 359 aaKnown RBP18.36■□□□□ 0.53
PCIF1-201ENST00000372409 GLI1P08151 1106 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 CYP4A11Q02928 519 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 PTPROQ16827 1216 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 DNAAF5Q86Y56 855 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 IFT20Q8IY31 132 aa18.36■□□□□ 0.53
PCIF1-201ENST00000372409 CCDC17Q96LX7 622 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms