RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FAM173BQ6P4H8 233 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 FOXP4Q8IVH2 680 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 TUBGCP3Q96CW5 907 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 ADPGKQ9BRR6 497 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 PIK3C2BO00750 1634 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 H7C1W4 665 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 M0R2C6 588 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 ASIC2Q16515 512 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 SERPINI1Q99574 410 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 BATF3Q9NR55 127 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 DDX25Q9UHL0 483 aaKnown RBP15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 TRIM16O95361 564 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 CCND2P30279 289 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 CASP10Q92851 521 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 DACH2Q96NX9 599 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 SNX5Q9Y5X3 404 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 POLR2DO15514 142 aaKnown RBP15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 EZH2Q15910 746 aaKnown RBP15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 LIN9Q5TKA1 542 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 ACRBPQ8NEB7 543 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 MINPP1Q9UNW1 487 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 SCG2P13521 617 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 SERPINB10P48595 397 aa15.19■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZMYM6O95789 1325 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 FOSP01100 380 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 YARSP54577 528 aaKnown RBP15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 OSBPL9Q96SU4 736 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 EXOC3O60645 756 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 BRD1O95696 1058 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 GPSM2P81274 684 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 MTX1Q13505 466 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 HP1BP3Q5SSJ5 553 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 USP31Q70CQ4 1352 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 KRT9P35527 623 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 POLGP54098 1239 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 GALNT17Q6IS24 598 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 TRIM42Q8IWZ5 723 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 SP8Q8IXZ3 490 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 WRNIP1Q96S55 665 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 KRT12Q99456 494 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 LRFN2Q9ULH4 789 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZC3H13Q5T200 1668 aaKnown RBP15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 PDHA1P08559 390 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 P4HA1P13674 534 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 CSGALNACT2Q8N6G5 542 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 SYCE1LA8MT33 242 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZBTB24O43167 697 aaPredicted RBP15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 SYDE2Q5VT97 1194 aa15.18■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZMYM1Q5SVZ6 1142 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 RC3H1Q5TC82 1133 aaKnown RBP15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 HORMAD1Q86X24 394 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 GINS4Q9BRT9 223 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 STOML1Q9UBI4 398 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 RASGRF2O14827 1237 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 TRMT10CQ7L0Y3 403 aaKnown RBP15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 ABI1Q8IZP0 508 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 FBXO18Q8NFZ0 1043 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 PYGLP06737 847 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 PTPN12Q05209 780 aaKnown RBP15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 NEK8Q86SG6 692 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 TDRD3Q9H7E2 651 aaKnown RBP15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 CACNB3P54284 484 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 PTH1RQ03431 593 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 GABPAQ06546 454 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 STX3Q13277 289 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 POSTNQ15063 836 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 LONRF3Q496Y0 759 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 CEP78Q5JTW2 689 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 CD209Q9NNX6 404 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 ADCY9O60503 1353 aa15.17■□□□□ 0.02
RAPGEF1-202ENST00000372190 GPC4O75487 556 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 UBXN2AP68543 259 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 RASGRF1Q13972 1273 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 CASC4Q6P4E1 433 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 RNF207Q6ZRF8 634 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 CELF1Q92879 486 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZNF274Q96GC6 653 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 OSBPL1AQ9BXW6 950 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ANO3Q9BYT9 981 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 PCDHA12Q9UN75 941 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ADCY3O60266 1144 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ASNSP08243 561 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 HOXD10P28358 340 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 SLC16A2P36021 539 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 DHX9Q08211 1270 aaKnown RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 KMT5BQ4FZB7 885 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ZNF653Q96CK0 615 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ANTXR1Q9H6X2 564 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 RTEL1Q9NZ71 1219 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 NFE2L3Q9Y4A8 694 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 LIG4P49917 911 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 ADCK1Q86TW2 530 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 FAM160B2Q86V87 743 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 MARCH10Q8NA82 808 aaPredicted RBP15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 RFWD2Q8NHY2 731 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 TSC1Q92574 1164 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 TRIM15Q9C019 465 aa15.16■□□□□ 0.02
RAPGEF1-202ENST00000372190 PARVBQ9HBI1 364 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms