RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SFI1A8K8P3 1242 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 RCAN1P53805 252 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 MESDQ14696 234 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 TRIM11Q96F44 468 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 GJB4Q9NTQ9 266 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 ANAPC4Q9UJX5 808 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.16
NDC1-201ENST00000371429 GOLGA8IPA6NC78 632 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 GOLGA8JA6NMD2 632 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 DPEP1P16444 411 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 CD58P19256 250 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 HHATQ5VTY9 493 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 KAZNQ674X7 775 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 BBS5Q8N3I7 341 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 MAN1B1Q9UKM7 699 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 ZNF148Q9UQR1 794 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 MAPK6Q16659 721 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 C12orf60Q5U649 245 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 FYB2Q5VWT5 728 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 VPS52Q8N1B4 723 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 ATP2A3Q93084 1043 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.15
NDC1-201ENST00000371429 LY9Q9HBG7 655 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 WDR19Q8NEZ3 1342 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.15
NDC1-201ENST00000371429 RFX7Q2KHR2 1363 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 POTEMA6NI47 508 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 ORC4O43929 436 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 RINT1Q6NUQ1 792 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 ARMCX2Q7L311 632 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 DEFB132Q7Z7B7 95 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 MB21D2Q8IYB1 491 aaPredicted RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 ADGRF4Q8IZF3 695 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 GCNT4Q9P109 453 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 SLC12A6Q9UHW9 1150 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 H7C0C1 242 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 MED7O43513 233 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 ATP5OP48047 213 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 C4orf50Q6ZRC1 276 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 INTS8Q75QN2 995 aaKnown RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 ADAT2Q7Z6V5 191 aaKnown RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 ZNF653Q96CK0 615 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 LRRC7Q96NW7 1537 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 TCP1P17987 556 aaKnown RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 MTMR3Q13615 1198 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 TAF1CQ15572 869 aaPredicted RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 BANK1Q8NDB2 785 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 RBM46Q8TBY0 533 aaKnown RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 KRT12Q99456 494 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 UBE2TQ9NPD8 197 aaPredicted RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 PPP2R2CQ9Y2T4 447 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 NTSR2O95665 410 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 HOXA7P31268 230 aaPredicted RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 TOB2Q14106 344 aaPredicted RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 TWF2Q6IBS0 349 aaKnown RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 RSBN1LQ6PCB5 846 aaPredicted RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 TOPORSQ9NS56 1045 aaPredicted RBP16.01■□□□□ 0.15
NDC1-201ENST00000371429 ATP8B3O60423 1300 aa16.01■□□□□ 0.15
NDC1-201ENST00000371429 MADDQ8WXG6 1647 aa16■□□□□ 0.15
NDC1-201ENST00000371429 LDHAP00338 332 aaKnown RBP16■□□□□ 0.15
NDC1-201ENST00000371429 XPAP23025 273 aaPredicted RBP16■□□□□ 0.15
NDC1-201ENST00000371429 U2AF2P26368 475 aaKnown RBP eCLIP16■□□□□ 0.15
NDC1-201ENST00000371429 MTMR2Q13614 643 aa16■□□□□ 0.15
NDC1-201ENST00000371429 STK36Q9NRP7 1315 aa16■□□□□ 0.15
NDC1-201ENST00000371429 PHKA2P46019 1235 aa16■□□□□ 0.15
NDC1-201ENST00000371429 RASSF7Q02833 373 aa16■□□□□ 0.15
NDC1-201ENST00000371429 STYK1Q6J9G0 422 aa16■□□□□ 0.15
NDC1-201ENST00000371429 ELMSAN1Q6PJG2 1045 aa16■□□□□ 0.15
NDC1-201ENST00000371429 SIX6OS1Q8N1H7 587 aa16■□□□□ 0.15
NDC1-201ENST00000371429 GGA3Q9NZ52 723 aa16■□□□□ 0.15
NDC1-201ENST00000371429 QRICH2Q9H0J4 1663 aa16■□□□□ 0.15
NDC1-201ENST00000371429 IKBKBO14920 756 aa16■□□□□ 0.15
NDC1-201ENST00000371429 PADI6Q6TGC4 694 aa16■□□□□ 0.15
NDC1-201ENST00000371429 PSPC1Q8WXF1 523 aaKnown RBP16■□□□□ 0.15
NDC1-201ENST00000371429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16■□□□□ 0.15
NDC1-201ENST00000371429 INPP5FQ9Y2H2 1132 aa16■□□□□ 0.15
NDC1-201ENST00000371429 AGLP35573 1532 aa16■□□□□ 0.15
NDC1-201ENST00000371429 CLDN3O15551 220 aa16■□□□□ 0.15
NDC1-201ENST00000371429 ANXA13P27216 316 aa16■□□□□ 0.15
NDC1-201ENST00000371429 COG2Q14746 738 aa16■□□□□ 0.15
NDC1-201ENST00000371429 P3H4Q92791 437 aa16■□□□□ 0.15
NDC1-201ENST00000371429 SLC38A10Q9HBR0 1119 aa16■□□□□ 0.15
NDC1-201ENST00000371429 ZNF302Q9NR11 478 aa16■□□□□ 0.15
NDC1-201ENST00000371429 RWDD2AQ9UIY3 292 aa16■□□□□ 0.15
NDC1-201ENST00000371429 SFNP31947 248 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 DENND2CQ68D51 928 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 PPP1R2P3Q6NXS1 205 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 LDHDQ86WU2 507 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 USP42Q9H9J4 1324 aaKnown RBP15.99■□□□□ 0.15
NDC1-201ENST00000371429 ASB14A6NK59 587 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 ENTPD3O75355 529 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 CSF1RP07333 972 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 SCARA5Q6ZMJ2 495 aa15.99■□□□□ 0.15
NDC1-201ENST00000371429 RIOK3O14730 519 aaKnown RBP15.99■□□□□ 0.15
NDC1-201ENST00000371429 PFDN6O15212 129 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms