RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 BEX3Q00994 111 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 KCNA10Q16322 511 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 DUSP28Q4G0W2 176 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 CEP55Q53EZ4 464 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 GNASQ5JWF2 1037 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 FOXD4L5Q5VV16 416 aaPredicted RBP12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 ZNF365Q70YC5 407 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 TLK2Q86UE8 772 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 PLA2G4DQ86XP0 818 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 DHX37Q8IY37 1157 aaKnown RBP12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 KLHDC9Q8NEP7 349 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 FOXD4L4Q8WXT5 416 aaPredicted RBP12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 HERVK_113Q902F9 699 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 VTI1AQ96AJ9 217 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 MLXIPQ9HAP2 919 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 JADE2Q9NQC1 790 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 DDX41Q9UJV9 622 aaKnown RBP12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 UBIAD1Q9Y5Z9 338 aa12.15□□□□□ -0.46
EXOSC1-203ENST00000370886 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 MYADML2A6NDP7 307 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 KIF28PB7ZC32 967 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 FAM86B1E9PN63 330 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 M0R2N6 131 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 DDX39AO00148 427 aaKnown RBP12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 TDP2O95551 362 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 GGPS1O95749 300 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 GH1P01241 217 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 FAM86B2P0C5J1 330 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 ARP10275 920 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 SP2Q02086 613 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 C16orf59Q7L2K0 433 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 CYFIP1Q7L576 1253 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 MICALL1Q8N3F8 863 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 NECAB3Q96P71 396 aaPredicted RBP12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 INPP4AQ96PE3 977 aaPredicted RBP12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 NKX2-4Q9H2Z4 354 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 BCAS3Q9H6U6 928 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 IL23AQ9NPF7 189 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 KCNH7Q9NS40 1196 aa12.14□□□□□ -0.47
EXOSC1-203ENST00000370886 MCM3APO60318 1980 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 ARVCFO00192 962 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 NOP56O00567 594 aaKnown RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 ATP9AO75110 1047 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 MYL3P08590 195 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 CYP3A4P08684 503 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 ACRP10323 421 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 BMP1P13497 986 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 SYT1P21579 422 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 UBA1P22314 1058 aaKnown RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 ANP32AP39687 249 aaKnown RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 CDK7P50613 346 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 USP11P51784 963 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 SEMA3FQ13275 785 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 FSCN1Q16658 493 aaKnown RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 PPP2R2DQ66LE6 453 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 CCSAPQ6IQ19 270 aaPredicted RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 KCNV1Q6PIU1 500 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 FAM126BQ8IXS8 530 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 AFG1LQ8WV93 481 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 TNFRSF25Q93038 417 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 GJA10Q969M2 543 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 SPATA33Q96N06 139 aa12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 FOXP1Q9H334 677 aaPredicted RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 DDX25Q9UHL0 483 aaKnown RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
EXOSC1-203ENST00000370886 MEIS1O00470 390 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 NKRFO15226 690 aaKnown RBP eCLIP12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 FGBP02675 491 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 ASGR1P07306 291 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 TGFB3P10600 412 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 ICAM3P32942 547 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 LAMC2Q13753 1193 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 NEDD9Q14511 834 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 ZNF174Q15697 407 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 BRDTQ58F21 947 aaPredicted RBP12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 TMEM31Q5JXX7 168 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 CELF3Q5SZQ8 465 aaKnown RBP12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 CRYGNQ8WXF5 182 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 SDF4Q9BRK5 362 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 ZNF577Q9BSK1 485 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 LRFN3Q9BTN0 628 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 AGO4Q9HCK5 861 aaKnown RBP12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 TCEAL9Q9UHQ7 104 aa12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 NOL7Q9UMY1 257 aaKnown RBP12.12□□□□□ -0.47
EXOSC1-203ENST00000370886 BRWD1Q9NSI6 2320 aa12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 EDIL3O43854 480 aa12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 ZEB2O60315 1214 aa12.11□□□□□ -0.47
EXOSC1-203ENST00000370886 MCM7P33993 719 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms