RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 DLGAP5Q15398 846 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 TMEM206Q9H813 350 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 KRT1P04264 644 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 CDC27P30260 824 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 RWDD2BP57060 319 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 ACTN3Q08043 901 aaPredicted RBP18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 ATP6V1G3Q96LB4 118 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 KIF28PB7ZC32 967 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 USP17L8P0C7I0 530 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 WDR11Q9BZH6 1224 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 DNAJC17Q9NVM6 304 aaKnown RBP18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 ANGPTL2Q9UKU9 493 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 NCK2O43639 380 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 TOM1O60784 492 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 MMEL1Q495T6 779 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 KCTD1Q719H9 257 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 MCF2L2Q86YR7 1114 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 FAM81BQ96LP2 452 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 PARVGQ9HBI0 331 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 HESX1Q9UBX0 185 aa18.51■□□□□ 0.55
PTP4A1-201ENST00000370651 UBN2Q6ZU65 1347 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 LRRIQ4A6NIV6 560 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 TAF12Q16514 161 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 DGKHQ86XP1 1220 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 PROM2Q8N271 834 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 LY9Q9HBG7 655 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 WDR91A4D1P6 747 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 DCTN3O75935 186 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 SLC16A2P36021 539 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 METTL16Q86W50 562 aaKnown RBP18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 HEG1Q9ULI3 1381 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 GPC4O75487 556 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 ZNF577Q9BSK1 485 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 ANKFY1Q9P2R3 1169 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 A0A1W2PQC6 194 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 MIF4GDA9UHW6 222 aaKnown RBP18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 PPP1R2P3Q6NXS1 205 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 PDZD4Q76G19 769 aaPredicted RBP18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 DYNLL2Q96FJ2 89 aa18.5■□□□□ 0.55
PTP4A1-201ENST00000370651 ROBO2Q9HCK4 1378 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 GRID2IPA4D2P6 1211 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 SAT1P21673 171 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 RCAN1P53805 252 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 TTLL11Q8NHH1 800 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 TSC22D3Q99576 134 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 TSPYL2Q9H2G4 693 aaPredicted RBP18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 VIPAS39Q9H9C1 493 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 SYNGAP1Q96PV0 1343 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 MMS19Q96T76 1030 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 CCDC117Q8IWD4 279 aaPredicted RBP18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 SPATA4Q8NEY3 305 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 SEPT10Q9P0V9 454 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 USP17L3A6NCW0 530 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 USP17L4A6NCW7 530 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 DDIT3P35638 169 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 BASP1P80723 227 aaKnown RBP18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 PFKFB3Q16875 520 aaPredicted RBP18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 ABCB5Q2M3G0 1257 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 USP17L1Q7RTZ2 530 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 LARGE2Q8N3Y3 721 aa18.49■□□□□ 0.55
PTP4A1-201ENST00000370651 MCF2LO15068 1137 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 POLGP54098 1239 aaPredicted RBP18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 SPARCL1Q14515 664 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 UBE2SQ16763 222 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 SAAL1Q96ER3 474 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 BRIP1Q9BX63 1249 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 NEO1Q92859 1461 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 HSPA2P54652 639 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 FAM83BQ5T0W9 1011 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 KIAA0825Q8IV33 1275 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 RIOK1Q9BRS2 568 aaKnown RBP18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 LEMD3Q9Y2U8 911 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 PVALEFA0A1B0GWK0 134 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 CPP00450 1065 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 TMCO4Q5TGY1 634 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 LRGUKQ96M69 825 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 MTA3Q9BTC8 594 aa18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 DDX47Q9H0S4 455 aaKnown RBP18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 CDC37Q16543 378 aaPredicted RBP18.48■□□□□ 0.55
PTP4A1-201ENST00000370651 LAMC1P11047 1609 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 TTC36A6NLP5 189 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 ATP5HO75947 161 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 GSTA1P08263 222 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 GSTA2P09210 222 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 ALDH1B1P30837 517 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 UBXN2AP68543 259 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 BBS9Q3SYG4 887 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 FAM47EQ6ZV65 393 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 INTUQ9ULD6 942 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 ERBB3P21860 1342 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 SPECC1L-ADORA2AF8WAN1 911 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 LMNAP02545 664 aaKnown RBP18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 CA8P35219 290 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 NT5C2P49902 561 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 DYNLT1P63172 113 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 GABPAQ06546 454 aa18.47■□□□□ 0.55
PTP4A1-201ENST00000370651 ANKRD20A4Q4UJ75 823 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms