RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
LMO4-202ENST00000370544 FTCDO95954 541 aa21.31■■□□□ 1
LMO4-202ENST00000370544 METTL23Q86XA0 190 aa21.31■■□□□ 1
LMO4-202ENST00000370544 MB21D2Q8IYB1 491 aaPredicted RBP21.31■■□□□ 1
LMO4-202ENST00000370544 DAAM1Q9Y4D1 1078 aa21.31■■□□□ 1
LMO4-202ENST00000370544 ADGRB3O60242 1522 aa21.31■■□□□ 1
LMO4-202ENST00000370544 SGO2Q562F6 1265 aa21.31■■□□□ 1
LMO4-202ENST00000370544 FAM149B1Q96BN6 582 aa21.31■■□□□ 1
LMO4-202ENST00000370544 MRPL47Q9HD33 250 aaKnown RBP21.31■■□□□ 1
LMO4-202ENST00000370544 DCP1AQ9NPI6 582 aaPredicted RBP21.31■■□□□ 1
LMO4-202ENST00000370544 SPTLC3Q9NUV7 552 aa21.31■■□□□ 1
LMO4-202ENST00000370544 NXF1Q9UBU9 619 aaKnown RBP21.31■■□□□ 1
LMO4-202ENST00000370544 HEXIM1O94992 359 aaKnown RBP21.31■■□□□ 1
LMO4-202ENST00000370544 KRT1P04264 644 aa21.31■■□□□ 1
LMO4-202ENST00000370544 KRT31Q15323 416 aa21.31■■□□□ 1
LMO4-202ENST00000370544 RPS6KA2Q15349 733 aa21.31■■□□□ 1
LMO4-202ENST00000370544 MB21D1Q8N884 522 aa21.31■■□□□ 1
LMO4-202ENST00000370544 PCDHA13Q9Y5I0 950 aa21.31■■□□□ 1
LMO4-202ENST00000370544 MYO3BQ8WXR4 1341 aa21.31■■□□□ 1
LMO4-202ENST00000370544 ECE2O60344 883 aa21.3■■□□□ 1
LMO4-202ENST00000370544 CUL4BQ13620 913 aa21.3■■□□□ 1
LMO4-202ENST00000370544 DNAJC24Q6P3W2 148 aa21.3■■□□□ 1
LMO4-202ENST00000370544 SPDYE16A6NNV3 312 aaPredicted RBP21.3■■□□□ 1
LMO4-202ENST00000370544 SPDYE2Q495Y8 402 aa21.3■■□□□ 1
LMO4-202ENST00000370544 FAM83BQ5T0W9 1011 aa21.3■■□□□ 1
LMO4-202ENST00000370544 ENAHQ8N8S7 591 aaPredicted RBP21.3■■□□□ 1
LMO4-202ENST00000370544 LY9Q9HBG7 655 aa21.3■■□□□ 1
LMO4-202ENST00000370544 MROH7-TTC4A0A0A0MT08 1334 aa21.3■■□□□ 1
LMO4-202ENST00000370544 PFDN6O15212 129 aa21.3■■□□□ 1
LMO4-202ENST00000370544 NDUFA10O95299 355 aa21.3■■□□□ 1
LMO4-202ENST00000370544 ADRA2BP18089 450 aa21.3■■□□□ 1
LMO4-202ENST00000370544 OSTNP61366 133 aa21.3■■□□□ 1
LMO4-202ENST00000370544 C2orf54Q08AI8 447 aa21.3■■□□□ 1
LMO4-202ENST00000370544 LRRC7Q96NW7 1537 aa21.3■■□□□ 1
LMO4-202ENST00000370544 UTYO14607 1347 aa21.3■■□□□ 1
LMO4-202ENST00000370544 NMT2O60551 498 aa21.3■■□□□ 1
LMO4-202ENST00000370544 EPB41L5Q9HCM4 733 aa21.3■■□□□ 1
LMO4-202ENST00000370544 STK38LQ9Y2H1 464 aa21.3■■□□□ 1
LMO4-202ENST00000370544 SAT1P21673 171 aa21.3■■□□□ 1
LMO4-202ENST00000370544 EPHB4P54760 987 aa21.3■■□□□ 1
LMO4-202ENST00000370544 SNX1Q13596 522 aa21.3■■□□□ 1
LMO4-202ENST00000370544 NXNQ6DKJ4 435 aa21.3■■□□□ 1
LMO4-202ENST00000370544 RCAN1P53805 252 aa21.29■■□□□ 1
LMO4-202ENST00000370544 NUF2Q9BZD4 464 aa21.29■■□□□ 1
LMO4-202ENST00000370544 PIM2Q9P1W9 311 aa21.29■■□□□ 1
LMO4-202ENST00000370544 ECEL1O95672 775 aa21.29■■□□□ 1
LMO4-202ENST00000370544 ATP1A3P13637 1013 aa21.29■■□□□ 1
LMO4-202ENST00000370544 JAK3P52333 1124 aa21.29■■□□□ 1
LMO4-202ENST00000370544 CCDC68Q9H2F9 335 aa21.29■■□□□ 1
LMO4-202ENST00000370544 UNC13DQ70J99 1090 aa21.29■■□□□ 1
LMO4-202ENST00000370544 ZNF579Q8NAF0 562 aaKnown RBP21.29■■□□□ 1
LMO4-202ENST00000370544 PBKQ96KB5 322 aa21.29■■□□□ 1
LMO4-202ENST00000370544 PPP1R12CQ9BZL4 782 aa21.29■■□□□ 1
LMO4-202ENST00000370544 GOLGA8IPA6NC78 632 aa21.29■■□□□ 1
LMO4-202ENST00000370544 GOLGA8JA6NMD2 632 aa21.29■■□□□ 1
LMO4-202ENST00000370544 POC1B-GALNT4F8VUJ3 575 aa21.29■■□□□ 1
LMO4-202ENST00000370544 BIRC2Q13490 618 aa21.29■■□□□ 1
LMO4-202ENST00000370544 SURF1Q15526 300 aa21.29■■□□□ 1
LMO4-202ENST00000370544 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
LMO4-202ENST00000370544 BCAP29Q9UHQ4 241 aa21.29■■□□□ 1
LMO4-202ENST00000370544 IPO11Q9UI26 975 aaKnown RBP21.29■■□□□ 1
LMO4-202ENST00000370544 A0A1B0GUA9 196 aa21.28■■□□□ 1
LMO4-202ENST00000370544 MYO1EQ12965 1108 aa21.28■■□□□ 1
LMO4-202ENST00000370544 PPP1R16BQ96T49 567 aa21.28■■□□□ 1
LMO4-202ENST00000370544 GDAQ9Y2T3 454 aa21.28■■□□□ 1
LMO4-202ENST00000370544 JRKLQ9Y4A0 524 aa21.28■■□□□ 1
LMO4-202ENST00000370544 CXCR5P32302 372 aa21.28■■□□□ 1
LMO4-202ENST00000370544 RSRC2Q7L4I2 434 aaKnown RBP21.28■■□□□ 1
LMO4-202ENST00000370544 PODNQ7Z5L7 613 aa21.28■■□□□ 1
LMO4-202ENST00000370544 MSTO1Q9BUK6 570 aa21.28■■□□□ 1
LMO4-202ENST00000370544 TDRD3Q9H7E2 651 aaKnown RBP21.28■■□□□ 1
LMO4-202ENST00000370544 SLC38A10Q9HBR0 1119 aa21.28■■□□□ 1
LMO4-202ENST00000370544 INHBAP08476 426 aa21.28■■□□□ 1
LMO4-202ENST00000370544 ZSCAN20P17040 1043 aaPredicted RBP21.28■■□□□ 1
LMO4-202ENST00000370544 CD58P19256 250 aa21.28■■□□□ 1
LMO4-202ENST00000370544 FOXO4P98177 505 aa21.28■■□□□ 1
LMO4-202ENST00000370544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.28■■□□□ 1
LMO4-202ENST00000370544 RNF14Q9UBS8 474 aa21.28■■□□□ 1
LMO4-202ENST00000370544 PPP1R18Q6NYC8 613 aa21.28■■□□□ 1
LMO4-202ENST00000370544 RAB3IPQ96QF0 476 aaPredicted RBP21.28■■□□□ 1
LMO4-202ENST00000370544 AFF2P51816 1311 aa21.28■■□□□ 1
LMO4-202ENST00000370544 USP31Q70CQ4 1352 aa21.28■■□□□ 1
LMO4-202ENST00000370544 MADDQ8WXG6 1647 aa21.27■■□□□ 1
LMO4-202ENST00000370544 SEC31AO94979 1220 aaKnown RBP21.27■■□□□ 1
LMO4-202ENST00000370544 GRM4Q14833 912 aa21.27■■□□□ 1
LMO4-202ENST00000370544 PHLDB2Q86SQ0 1253 aa21.27■■□□□ 1
LMO4-202ENST00000370544 ALX1Q15699 326 aa21.27■■□□□ 1
LMO4-202ENST00000370544 KCTD16Q68DU8 428 aa21.27■■□□□ 1
LMO4-202ENST00000370544 RNF10Q8N5U6 811 aaKnown RBP21.27■■□□□ 1
LMO4-202ENST00000370544 SLC44A5Q8NCS7 719 aa21.27■■□□□ 1
LMO4-202ENST00000370544 BCAS4Q8TDM0 211 aa21.27■■□□□ 1
LMO4-202ENST00000370544 LRRC8CQ8TDW0 803 aa21.27■■□□□ 1
LMO4-202ENST00000370544 CPVLQ9H3G5 476 aa21.27■■□□□ 1
LMO4-202ENST00000370544 BAIAP2L1Q9UHR4 511 aa21.27■■□□□ 1
LMO4-202ENST00000370544 MED14O60244 1454 aa21.27■■□□□ 1
LMO4-202ENST00000370544 POTEMA6NI47 508 aa21.27■■□□□ 1
LMO4-202ENST00000370544 SFI1A8K8P3 1242 aa21.27■■□□□ 1
LMO4-202ENST00000370544 MCF2LO15068 1137 aa21.27■■□□□ 1
LMO4-202ENST00000370544 ZMYND10O75800 440 aa21.27■■□□□ 1
LMO4-202ENST00000370544 MTA3Q9BTC8 594 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms