RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 PDZD8Q8NEN9 1154 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 AFG1LQ8WV93 481 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 RMDN3Q96TC7 470 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 MMP19Q99542 508 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 TMEM206Q9H813 350 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 PIDD1Q9HB75 910 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 LAD1O00515 517 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 SH2B2O14492 632 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 EEF1GP26641 437 aaKnown RBP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 CHRNA5P30532 468 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 SGO2Q562F6 1265 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 HABP4Q5JVS0 413 aaKnown RBP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 RNF219Q5W0B1 726 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 CROCCP2Q86T23 111 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 RHPN2Q8IUC4 686 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 SPDL1Q96EA4 605 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 TBK1Q9UHD2 729 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 MOCS3O95396 460 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 MMP1P03956 469 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 BRD3Q15059 726 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 KCTD16Q68DU8 428 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 PCDHB6Q9Y5E3 794 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 ERBB3P21860 1342 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 FTCDO95954 541 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 ANO4Q32M45 955 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 TRIM68Q6AZZ1 485 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 FAM160B2Q86V87 743 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 G3BP2Q9UN86 482 aaKnown RBP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 SCAF8Q9UPN6 1271 aaKnown RBP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 ZNF233A6NK53 670 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 SERPINB6P35237 376 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 MCAMP43121 646 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 NSUN2Q08J23 767 aaKnown RBP eCLIP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 SZRD1Q7Z422 152 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 LMNTD2Q8IXW0 634 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 FBXO18Q8NFZ0 1043 aa9.25□□□□□ -0.93
ABCA4-201ENST00000370225 DDX27Q96GQ7 796 aaKnown RBP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 EPN1Q9Y6I3 576 aaPredicted RBP9.25□□□□□ -0.93
ABCA4-201ENST00000370225 ERVV-1B6SEH8 477 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 PRDX5P30044 214 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 GNGT1P63211 74 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 C2orf54Q08AI8 447 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 TMED2Q15363 201 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 RC3H1Q5TC82 1133 aaKnown RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 RNF10Q8N5U6 811 aaKnown RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 TSC1Q92574 1164 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 EMILIN3Q9NT22 766 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 DPYSL4O14531 572 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 PMLP29590 882 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 ARHGAP4P98171 946 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 THEM5Q8N1Q8 247 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 SLC44A5Q8NCS7 719 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 MAP4K1Q92918 833 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 MAN1B1Q9UKM7 699 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 PCDHA6Q9UN73 950 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 PCDHA8Q9Y5H6 950 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 USP6P35125 1406 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 IFNAR2P48551 515 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 DEPDC1BQ8WUY9 529 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 DNAJC17Q9NVM6 304 aaKnown RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 BAIAP2L1Q9UHR4 511 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 PCDHA5Q9Y5H7 936 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 PSMD2Q13200 908 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 SEPT2Q15019 361 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 STXBP2Q15833 593 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 ANGPTL8Q6UXH0 198 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 GPT2Q8TD30 523 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 KLHL14Q9P2G3 628 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 NEO1Q92859 1461 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 A0A0G2JLW4 131 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 GPC4O75487 556 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 ASNSP08243 561 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 RFC1P35251 1148 aaPredicted RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 ASPHQ12797 758 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 SMAD1Q15797 465 aaKnown RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 ARHGEF1Q92888 912 aaKnown RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 RPGRIP1Q96KN7 1286 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 LRGUKQ96M69 825 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 BHMT2Q9H2M3 363 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 KCNQ2O43526 872 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 PPFIA4O75335 1185 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 GNL1P36915 607 aaPredicted RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 GPSM2P81274 684 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 ZNF658Q5TYW1 1059 aaPredicted RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 TMEM179Q6ZVK1 233 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 ARMCX2Q7L311 632 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 LRRC8AQ8IWT6 810 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 NSUN7Q8NE18 718 aaKnown RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 TTLL11Q8NHH1 800 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 LRRC8CQ8TDW0 803 aa9.24□□□□□ -0.93
ABCA4-201ENST00000370225 MMTAG2Q9BU76 263 aaKnown RBP9.24□□□□□ -0.93
ABCA4-201ENST00000370225 LRRD1A4D1F6 860 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 PTPN12Q05209 780 aaKnown RBP9.23□□□□□ -0.93
ABCA4-201ENST00000370225 DBN1Q16643 649 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 WHAMMP3Q1A5X7 153 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 TSNAXIP1Q2TAA8 658 aa9.23□□□□□ -0.93
ABCA4-201ENST00000370225 USP17L15C9J2P7 530 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms