RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 KLHL10Q6JEL2 608 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 HAS1Q92839 578 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 NAP1L4Q99733 375 aaKnown RBP19.35■□□□□ 0.69
UBE3D-203ENST00000369747 WDR11Q9BZH6 1224 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 ADD3Q9UEY8 706 aaKnown RBP19.35■□□□□ 0.69
UBE3D-203ENST00000369747 MEIS1O00470 390 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 RPN1P04843 607 aaKnown RBP19.35■□□□□ 0.69
UBE3D-203ENST00000369747 SPATA1Q5VX52 437 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 MXRA8Q9BRK3 442 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 ARHGAP39Q9C0H5 1083 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 KCNMB3Q9NPA1 279 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 ZSWIM8A7E2V4 1837 aa19.35■□□□□ 0.69
UBE3D-203ENST00000369747 TPM2P07951 284 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 ARP10275 920 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 CDK11BP21127 795 aaKnown RBP19.34■□□□□ 0.69
UBE3D-203ENST00000369747 CCND2P30279 289 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 TXKP42681 527 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 STX17P56962 302 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 ZNF792Q3KQV3 632 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 CABP7Q86V35 215 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 RASSF8Q8NHQ8 419 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 ETNPPLQ8TBG4 499 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 KBTBD4Q9NVX7 518 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 UBIAD1Q9Y5Z9 338 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 PLXNA1Q9UIW2 1896 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 BRCA2P51587 3418 aa19.34■□□□□ 0.69
UBE3D-203ENST00000369747 MSH4O15457 936 aa19.33■□□□□ 0.69
UBE3D-203ENST00000369747 RGS20O76081 388 aa19.33■□□□□ 0.69
UBE3D-203ENST00000369747 SFPQP23246 707 aaKnown RBP eCLIP19.33■□□□□ 0.69
UBE3D-203ENST00000369747 TECP42680 631 aa19.33■□□□□ 0.69
UBE3D-203ENST00000369747 CAP1Q01518 475 aa19.33■□□□□ 0.69
UBE3D-203ENST00000369747 DHX8Q14562 1220 aaKnown RBP19.33■□□□□ 0.69
UBE3D-203ENST00000369747 IGSF22Q8N9C0 903 aa19.33■□□□□ 0.69
UBE3D-203ENST00000369747 IWS1Q96ST2 819 aa19.33■□□□□ 0.69
UBE3D-203ENST00000369747 PLIN2Q99541 437 aa19.33■□□□□ 0.69
UBE3D-203ENST00000369747 RMND1Q9NWS8 449 aa19.33■□□□□ 0.69
UBE3D-203ENST00000369747 PLCG1P19174 1290 aa19.33■□□□□ 0.68
UBE3D-203ENST00000369747 EDNRBP24530 442 aa19.33■□□□□ 0.68
UBE3D-203ENST00000369747 LACTBP83111 547 aaPredicted RBP19.33■□□□□ 0.68
UBE3D-203ENST00000369747 PTPN21Q16825 1174 aa19.33■□□□□ 0.68
UBE3D-203ENST00000369747 MORN1Q5T089 497 aa19.33■□□□□ 0.68
UBE3D-203ENST00000369747 ZNF658Q5TYW1 1059 aaPredicted RBP19.33■□□□□ 0.68
UBE3D-203ENST00000369747 DPP9Q86TI2 863 aa19.33■□□□□ 0.68
UBE3D-203ENST00000369747 MMTAG2Q9BU76 263 aaKnown RBP19.33■□□□□ 0.68
UBE3D-203ENST00000369747 CFHR5Q9BXR6 569 aa19.33■□□□□ 0.68
UBE3D-203ENST00000369747 KCNH7Q9NS40 1196 aa19.33■□□□□ 0.68
UBE3D-203ENST00000369747 MCM3APO60318 1980 aa19.33■□□□□ 0.68
UBE3D-203ENST00000369747 SLC15A5A6NIM6 579 aa19.32■□□□□ 0.68
UBE3D-203ENST00000369747 CDKAL1Q5VV42 579 aa19.32■□□□□ 0.68
UBE3D-203ENST00000369747 JADE2Q9NQC1 790 aa19.32■□□□□ 0.68
UBE3D-203ENST00000369747 CTNND2Q9UQB3 1225 aa19.32■□□□□ 0.68
UBE3D-203ENST00000369747 TNPO2O14787 897 aaKnown RBP19.31■□□□□ 0.68
UBE3D-203ENST00000369747 MARCH6O60337 910 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 MYL1P05976 194 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 PSMC4P43686 418 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 MTMR1Q13613 665 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 STXBP2Q15833 593 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 XRRA1Q6P2D8 792 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 APTXQ7Z2E3 356 aaKnown RBP19.31■□□□□ 0.68
UBE3D-203ENST00000369747 TRIM47Q96LD4 638 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 INPP4AQ96PE3 977 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-203ENST00000369747 CUEDC2Q9H467 287 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 MGAMO43451 1857 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 USP27XA6NNY8 438 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 KLRC4O43908 158 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 FXR2P51116 673 aaKnown RBP eCLIP19.31■□□□□ 0.68
UBE3D-203ENST00000369747 SP3Q02447 781 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 PDE4DQ08499 809 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 EEPD1Q7L9B9 569 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 NPLOC4Q8TAT6 608 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 PRIMPOLQ96LW4 560 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 MAGEF1Q9HAY2 307 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 KCND1Q9NSA2 647 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 PKD2L1Q9P0L9 805 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 GJD2Q9UKL4 321 aa19.31■□□□□ 0.68
UBE3D-203ENST00000369747 LRRC37A2A6NM11 1700 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 KIAA1217Q5T5P2 1943 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 A0A1B0GTH6 734 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 EIF3JO75822 258 aaKnown RBP19.3■□□□□ 0.68
UBE3D-203ENST00000369747 SETQ01105 290 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-203ENST00000369747 TBX2Q13207 712 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-203ENST00000369747 KCNB1Q14721 858 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 NR1I3Q14994 352 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 C16orf45Q96MC5 204 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-203ENST00000369747 RWDD2AQ9UIY3 292 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 PCDHA12Q9UN75 941 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 GDAQ9Y2T3 454 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 ZNF236Q9UL36 1845 aa19.3■□□□□ 0.68
UBE3D-203ENST00000369747 UQCRHLA0A096LP55 91 aa19.29■□□□□ 0.68
UBE3D-203ENST00000369747 IPO5O00410 1097 aaKnown RBP19.29■□□□□ 0.68
UBE3D-203ENST00000369747 UQCRHP07919 91 aa19.29■□□□□ 0.68
UBE3D-203ENST00000369747 MAP2K5Q13163 448 aa19.29■□□□□ 0.68
UBE3D-203ENST00000369747 SEMA3FQ13275 785 aa19.29■□□□□ 0.68
UBE3D-203ENST00000369747 TPD52L1Q16890 204 aaPredicted RBP19.29■□□□□ 0.68
UBE3D-203ENST00000369747 NIPA1Q7RTP0 329 aa19.29■□□□□ 0.68
UBE3D-203ENST00000369747 USP6NLQ92738 828 aa19.29■□□□□ 0.68
UBE3D-203ENST00000369747 MAML3Q96JK9 1138 aa19.29■□□□□ 0.68
UBE3D-203ENST00000369747 ZNF577Q9BSK1 485 aa19.29■□□□□ 0.68
UBE3D-203ENST00000369747 POTEMA6NI47 508 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms