RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ATP6V0A1Q93050 837 aa19.62■□□□□ 0.73
SNX27-202ENST00000368841 ABTB1Q969K4 478 aaPredicted RBP19.62■□□□□ 0.73
SNX27-202ENST00000368841 FAM196BA6NMK8 535 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 PDE8BO95263 885 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 NPR1P16066 1061 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 PCGF5Q86SE9 256 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 RASEFQ8IZ41 740 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 BBS5Q8N3I7 341 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 RNF139Q8WU17 664 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 PLCG1P19174 1290 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 NFX1Q12986 1120 aaKnown RBP19.61■□□□□ 0.73
SNX27-202ENST00000368841 SLC27A3Q5K4L6 730 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 CNKSR1Q969H4 720 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.61■□□□□ 0.73
SNX27-202ENST00000368841 CPVLQ9H3G5 476 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 SARS2Q9NP81 518 aaKnown RBP19.61■□□□□ 0.73
SNX27-202ENST00000368841 TLK1Q9UKI8 766 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 ACSL3O95573 720 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 BMP3P12645 472 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 CDC37Q16543 378 aaPredicted RBP19.61■□□□□ 0.73
SNX27-202ENST00000368841 PCDHB6Q9Y5E3 794 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 HNRNPCL2B2RXH8 293 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 HNRNPCL1O60812 293 aaKnown RBP19.61■□□□□ 0.73
SNX27-202ENST00000368841 DAAM1Q9Y4D1 1078 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 TCP1P17987 556 aaKnown RBP19.61■□□□□ 0.73
SNX27-202ENST00000368841 MSTO1Q9BUK6 570 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 TRIM4Q9C037 500 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 RPF1Q9H9Y2 349 aaKnown RBP19.61■□□□□ 0.73
SNX27-202ENST00000368841 BABAM1Q9NWV8 329 aa19.61■□□□□ 0.73
SNX27-202ENST00000368841 PEX3P56589 373 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 NOP14P78316 857 aaKnown RBP19.6■□□□□ 0.73
SNX27-202ENST00000368841 ART3Q13508 389 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 ASPRV1Q53RT3 343 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 PDXDC2PQ6P474 469 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 ARMC9Q7Z3E5 817 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 CACTINQ8WUQ7 758 aaKnown RBP19.6■□□□□ 0.73
SNX27-202ENST00000368841 ZCWPW1Q9H0M4 648 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 FAN1Q9Y2M0 1017 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 EIF4A3P38919 411 aaKnown RBP19.6■□□□□ 0.73
SNX27-202ENST00000368841 BBS9Q3SYG4 887 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 CASP1P29466 404 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 ESRRBO95718 433 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 MECOMQ03112 1051 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 MIS12Q9H081 205 aa19.6■□□□□ 0.73
SNX27-202ENST00000368841 A6NNZ2 444 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 TUBB8Q3ZCM7 444 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 PPP6R3Q5H9R7 873 aaPredicted RBP19.59■□□□□ 0.73
SNX27-202ENST00000368841 CCDC197Q8NCU1 140 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 CCDC138Q96M89 665 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 EIF4E1BA6NMX2 242 aaKnown RBP19.59■□□□□ 0.73
SNX27-202ENST00000368841 PIK3R2O00459 728 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 PLEKHA8P1O95397 391 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 MT-ND3P03897 115 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 PLA2G4BP0C869 781 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 MMTAG2Q9BU76 263 aaKnown RBP19.59■□□□□ 0.73
SNX27-202ENST00000368841 PCDHA13Q9Y5I0 950 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 CCNA1P78396 465 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 GABPB1Q06547 395 aaPredicted RBP19.59■□□□□ 0.73
SNX27-202ENST00000368841 ZNF658Q5TYW1 1059 aaPredicted RBP19.59■□□□□ 0.73
SNX27-202ENST00000368841 AOC3Q16853 763 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 TBX22Q9Y458 520 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 H3BRJ5 948 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 SUN1O94901 812 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 ZNF467Q7Z7K2 595 aaPredicted RBP19.59■□□□□ 0.73
SNX27-202ENST00000368841 TRIM59Q8IWR1 403 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 THNSL1Q8IYQ7 743 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 FAF2Q96CS3 445 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 HEMGNQ9BXL5 484 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 AFF4Q9UHB7 1163 aaKnown RBP19.59■□□□□ 0.73
SNX27-202ENST00000368841 GCNAQ96QF7 691 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 ABCB11O95342 1321 aa19.59■□□□□ 0.73
SNX27-202ENST00000368841 XPOTO43592 962 aaKnown RBP19.58■□□□□ 0.73
SNX27-202ENST00000368841 DHX9Q08211 1270 aaKnown RBP19.58■□□□□ 0.73
SNX27-202ENST00000368841 ANKRD20A4Q4UJ75 823 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 ANKRD20A8PQ5CZ79 823 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 ANKRD20A2Q5SQ80 823 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 ANKRD20A1Q5TYW2 823 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 BBOF1Q8ND07 529 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 PSDA5PKW4 1024 aaPredicted RBP19.58■□□□□ 0.73
SNX27-202ENST00000368841 SSH3Q8TE77 659 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 IQCDQ96DY2 449 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 SLC4A7Q9Y6M7 1214 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 ABCC4O15439 1325 aa19.58■□□□□ 0.73
SNX27-202ENST00000368841 C21orf2O43822 256 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 PSMA2P25787 234 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 MYO1EQ12965 1108 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 FRA10AC1Q70Z53 315 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 SH3RF3Q8TEJ3 882 aaPredicted RBP19.58■□□□□ 0.72
SNX27-202ENST00000368841 SCHIP1Q9P0W5 487 aaPredicted RBP19.58■□□□□ 0.72
SNX27-202ENST00000368841 NCLNQ969V3 563 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 MED7O43513 233 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 CREB3O43889 395 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 CYP2D6P10635 497 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 ATICP31939 592 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 ELF1P32519 619 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 GYS2P54840 703 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 GALNT17Q6IS24 598 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 APOA5Q6Q788 366 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 FBXL13Q8NEE6 735 aa19.58■□□□□ 0.72
SNX27-202ENST00000368841 HAUS4Q9H6D7 363 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms