RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 RBAK-RBAKDNI3L0D1 243 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 PPFIA3O75145 1194 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 PDE6AP16499 860 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 ARHGAP1Q07960 439 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 KDF1Q8NAX2 398 aaPredicted RBP12.29□□□□□ -0.44
TUBE1-201ENST00000368657 ATRIPQ8WXE1 791 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 CASP10Q92851 521 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 ATP6V0A1Q93050 837 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 MEIS3Q99687 375 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 OSBPL7Q9BZF2 842 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 PCDHB12Q9Y5F1 795 aa12.29□□□□□ -0.44
TUBE1-201ENST00000368657 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 SPEGQ15772 3267 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 C17orf102A2RUQ5 167 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 PPFIA4O75335 1185 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 ICAM1P05362 532 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 HIC1Q14526 733 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 LY6KQ17RY6 165 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 FAM26DQ5JW98 314 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 CHST3Q7LGC8 479 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 EMID1Q96A84 441 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-201ENST00000368657 ACSF2Q96CM8 615 aaPredicted RBP12.28□□□□□ -0.44
TUBE1-201ENST00000368657 MKNK2Q9HBH9 465 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 ISY1Q9ULR0 285 aaKnown RBP12.28□□□□□ -0.44
TUBE1-201ENST00000368657 SIT1Q9Y3P8 196 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 PCDHGA2Q9Y5H1 932 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 STK24Q9Y6E0 443 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
TUBE1-201ENST00000368657 LCTP09848 1927 aa12.27□□□□□ -0.44
TUBE1-201ENST00000368657 IGKV6D-41A0A0C4DH26 115 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 PRKAB2O43741 272 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 TBC1D4O60343 1298 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 TTLL1O95922 423 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 RASA1P20936 1047 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 ERVFC1P60507 584 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 LAMC2Q13753 1193 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 ATAT1Q5SQI0 421 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 PHLDB3Q6NSJ2 640 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 FAM9BQ8IZU0 186 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 GMCL1Q96IK5 515 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 ARMT1Q9H993 441 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 AAASQ9NRG9 546 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 MTMR4Q9NYA4 1195 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 DLGAP2Q9P1A6 1054 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 DBNLQ9UJU6 430 aaKnown RBP12.27□□□□□ -0.45
TUBE1-201ENST00000368657 DBR1Q9UK59 544 aaKnown RBP12.27□□□□□ -0.45
TUBE1-201ENST00000368657 FBXO4Q9UKT5 387 aa12.27□□□□□ -0.45
TUBE1-201ENST00000368657 FSCN2O14926 492 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 EOMESO95936 686 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 CALML3P27482 149 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 SLC1A4P43007 532 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 LLGL2Q6P1M3 1020 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 CTR9Q6PD62 1173 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 RNF207Q6ZRF8 634 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 PPTC7Q8NI37 304 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
TUBE1-201ENST00000368657 GMEB2Q9UKD1 530 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 PRR12Q9ULL5 1215 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 TTC3P53804 2025 aa12.26□□□□□ -0.45
TUBE1-201ENST00000368657 GREB1LQ9C091 1923 aaPredicted RBP12.25□□□□□ -0.45
TUBE1-201ENST00000368657 TCRBV5S4A2TA0A5A2 114 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 CTSHP09668 335 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 STAG3L1P0CL83 205 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 GNAT1P11488 350 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 OS9Q13438 667 aaPredicted RBP12.25□□□□□ -0.45
TUBE1-201ENST00000368657 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 N4BP2L1Q5TBK1 243 aaPredicted RBP12.25□□□□□ -0.45
TUBE1-201ENST00000368657 RCSD1Q6JBY9 416 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 ZNF444Q8N0Y2 327 aaPredicted RBP12.25□□□□□ -0.45
TUBE1-201ENST00000368657 GPR20Q99678 358 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 CCDC8Q9H0W5 538 aaPredicted RBP12.25□□□□□ -0.45
TUBE1-201ENST00000368657 EPC1Q9H2F5 836 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 KCNK12Q9HB15 430 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 NGRNQ9NPE2 291 aaKnown RBP12.25□□□□□ -0.45
TUBE1-201ENST00000368657 IGSF9Q9P2J2 1179 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 PUF60Q9UHX1 559 aaKnown RBP12.25□□□□□ -0.45
TUBE1-201ENST00000368657 PNMA2Q9UL42 364 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 LHX6Q9UPM6 363 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 SMG5Q9UPR3 1016 aaKnown RBP12.25□□□□□ -0.45
TUBE1-201ENST00000368657 LZTS1Q9Y250 596 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 FRYQ5TBA9 3013 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 MYH7BA7E2Y1 1941 aa12.25□□□□□ -0.45
TUBE1-201ENST00000368657 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.24□□□□□ -0.45
TUBE1-201ENST00000368657 KRBA1A5PL33 1030 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 TMEM8BA6NDV4 472 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 TAF4O00268 1085 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 NFIBO00712 420 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 MAST4O15021 2626 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 TREHO43280 583 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 FGF18O76093 207 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 ZIC2O95409 532 aaPredicted RBP12.24□□□□□ -0.45
TUBE1-201ENST00000368657 DCNP07585 359 aaKnown RBP12.24□□□□□ -0.45
TUBE1-201ENST00000368657 ZNF286BP0CG31 522 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 HOXD8P13378 290 aaPredicted RBP12.24□□□□□ -0.45
TUBE1-201ENST00000368657 HOXC8P31273 242 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 SNAP25P60880 206 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 RING1Q06587 406 aa12.24□□□□□ -0.45
TUBE1-201ENST00000368657 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.45
TUBE1-201ENST00000368657 KIAA1841Q6NSI8 718 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms