RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 GPR20Q99678 358 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 UNC45AQ9H3U1 944 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 TTC12Q9H892 705 aaPredicted RBP15.69■□□□□ 0.1
TPM3-211ENST00000368531 PCDHA12Q9UN75 941 aa15.69■□□□□ 0.1
TPM3-211ENST00000368531 TCHHQ07283 1943 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 MYH9P35579 1960 aaKnown RBP15.68■□□□□ 0.1
TPM3-211ENST00000368531 A6NJR5 290 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 DNM1LO00429 736 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 ZNF286BP0CG31 522 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 CST5P28325 142 aaPredicted RBP15.68■□□□□ 0.1
TPM3-211ENST00000368531 TCF7P36402 384 aaPredicted RBP15.68■□□□□ 0.1
TPM3-211ENST00000368531 TECP42680 631 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 ACLYP53396 1101 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 ORC2Q13416 577 aaPredicted RBP15.68■□□□□ 0.1
TPM3-211ENST00000368531 DGKDQ16760 1214 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 MIER3Q7Z3K6 550 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 PPP1R13LQ8WUF5 828 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 SEPT1Q8WYJ6 367 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 ZNF396Q96N95 335 aaPredicted RBP15.68■□□□□ 0.1
TPM3-211ENST00000368531 USP28Q96RU2 1077 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 ELP1O95163 1332 aa15.68■□□□□ 0.1
TPM3-211ENST00000368531 KIAA0100Q14667 2235 aaKnown RBP15.67■□□□□ 0.1
TPM3-211ENST00000368531 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
TPM3-211ENST00000368531 NKX3-2P78367 333 aa15.67■□□□□ 0.1
TPM3-211ENST00000368531 KRT76Q01546 638 aa15.67■□□□□ 0.1
TPM3-211ENST00000368531 DNM1Q05193 864 aaKnown RBP15.67■□□□□ 0.1
TPM3-211ENST00000368531 NCAPH2Q6IBW4 605 aa15.67■□□□□ 0.1
TPM3-211ENST00000368531 CCSAPQ6IQ19 270 aaPredicted RBP15.67■□□□□ 0.1
TPM3-211ENST00000368531 ZNF746Q6NUN9 644 aaPredicted RBP15.67■□□□□ 0.1
TPM3-211ENST00000368531 TRIM50Q86XT4 487 aa15.67■□□□□ 0.1
TPM3-211ENST00000368531 PAWRQ96IZ0 340 aaKnown RBP15.67■□□□□ 0.1
TPM3-211ENST00000368531 TSEN34Q9BSV6 310 aaKnown RBP15.67■□□□□ 0.1
TPM3-211ENST00000368531 SENP6Q9GZR1 1112 aaPredicted RBP15.67■□□□□ 0.1
TPM3-211ENST00000368531 POLR3EQ9NVU0 708 aa15.67■□□□□ 0.1
TPM3-211ENST00000368531 VAV3Q9UKW4 847 aa15.67■□□□□ 0.1
TPM3-211ENST00000368531 EML1O00423 815 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 BACH1O14867 736 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 PPFIA4O75335 1185 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 CAPN15O75808 1086 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 LGALS2P05162 132 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 NCLP19338 710 aaKnown RBP15.66■□□□□ 0.1
TPM3-211ENST00000368531 PSMC6P62333 389 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 ATP2C1P98194 919 aaPredicted RBP15.66■□□□□ 0.1
TPM3-211ENST00000368531 PURAQ00577 322 aaKnown RBP15.66■□□□□ 0.1
TPM3-211ENST00000368531 SWSAP1Q6NVH7 229 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 MIS18BP1Q6P0N0 1132 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 TRMT1LQ7Z2T5 733 aaKnown RBP15.66■□□□□ 0.1
TPM3-211ENST00000368531 ANKLE1Q8NAG6 615 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 GLG1Q92896 1179 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 MTG1Q9BT17 334 aaPredicted RBP15.66■□□□□ 0.1
TPM3-211ENST00000368531 DISC1Q9NRI5 854 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 CEP131Q9UPN4 1083 aa15.66■□□□□ 0.1
TPM3-211ENST00000368531 A0A1W2PQ45 241 aaPredicted RBP15.65■□□□□ 0.1
TPM3-211ENST00000368531 A0A1W2PQY0 241 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 MOXD2PA6NHM9 499 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 POTEMA6NI47 508 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 WDR64B1ANS9 1081 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 KPNA6O60684 536 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 PSAPP07602 524 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 SUPT20HL2P0C7V6 817 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 MARK3P27448 753 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 MARCKSP29966 332 aaPredicted RBP15.65■□□□□ 0.1
TPM3-211ENST00000368531 PPP2R5CQ13362 524 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 STK38Q15208 465 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 IL17AQ16552 155 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 TMEM266Q2M3C6 531 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 ABHD15Q6UXT9 468 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 DTHD1Q6ZMT9 781 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 GLT1D1Q96MS3 346 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 PCYT2Q99447 389 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 C11orf49Q9H6J7 331 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 CHMP5Q9NZZ3 219 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
TPM3-211ENST00000368531 PHF24Q9UPV7 400 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 PCDHA10Q9Y5I2 948 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 CENPFP49454 3210 aa15.65■□□□□ 0.1
TPM3-211ENST00000368531 VWA3AA6NCI4 1184 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 H3BRB1 525 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 LAD1O00515 517 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 ATG7O95352 703 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 BMP15O95972 392 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 SFNP31947 248 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 JAK3P52333 1124 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 ATN1P54259 1190 aaPredicted RBP15.64■□□□□ 0.09
TPM3-211ENST00000368531 PTPAQ15257 358 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 NECAB2Q7Z6G3 386 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 CCDC60Q8IWA6 550 aaPredicted RBP15.64■□□□□ 0.09
TPM3-211ENST00000368531 SMAP1Q8IYB5 467 aaPredicted RBP15.64■□□□□ 0.09
TPM3-211ENST00000368531 BANK1Q8NDB2 785 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 C16orf70Q9BSU1 422 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 TUT1Q9H6E5 874 aaKnown RBP15.64■□□□□ 0.09
TPM3-211ENST00000368531 AZI2Q9H6S1 392 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 STARD7Q9NQZ5 370 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 ZNF302Q9NR11 478 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 GABBR1Q9UBS5 961 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 ATP6V1DQ9Y5K8 247 aa15.64■□□□□ 0.09
TPM3-211ENST00000368531 HOXD8P13378 290 aaPredicted RBP15.63■□□□□ 0.09
TPM3-211ENST00000368531 PRPHP41219 470 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 PSEN2P49810 448 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms