RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PRPSAP1Q14558 356 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 MAN2A1Q16706 1144 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 CACTINQ8WUQ7 758 aaKnown RBP13.99□□□□□ -0.17
PTPRK-207ENST00000368226 RMDN3Q96TC7 470 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 ZWILCHQ9H900 591 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 MRPS25P82663 173 aaKnown RBP13.99□□□□□ -0.17
PTPRK-207ENST00000368226 CYP4F22Q6NT55 531 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 DSTYKQ6XUX3 929 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 FOXP4Q8IVH2 680 aaPredicted RBP13.99□□□□□ -0.17
PTPRK-207ENST00000368226 C2orf69Q8N8R5 385 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 KCTD6Q8NC69 237 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 HSPH1Q92598 858 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 TMEM206Q9H813 350 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 ANAPC5Q9UJX4 755 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 PREX2Q70Z35 1606 aa13.99□□□□□ -0.17
PTPRK-207ENST00000368226 SLC12A1Q13621 1099 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 TTC30AQ86WT1 665 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 CHMP6Q96FZ7 201 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 LRRC4Q9HBW1 653 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 GDAQ9Y2T3 454 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 RESTQ13127 1097 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 DNAJC24Q6P3W2 148 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 JPH2Q9BR39 696 aaPredicted RBP13.98□□□□□ -0.17
PTPRK-207ENST00000368226 DNAJC17Q9NVM6 304 aaKnown RBP13.98□□□□□ -0.17
PTPRK-207ENST00000368226 GBP1P32455 592 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 BASP1P80723 227 aaKnown RBP13.98□□□□□ -0.17
PTPRK-207ENST00000368226 NECTIN1Q15223 517 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 MRFAP1L1Q96HT8 127 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 CDHR1Q96JP9 859 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 MIS12Q9H081 205 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 PASKQ96RG2 1323 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 STAT3P40763 770 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 IFNAR2P48551 515 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 MXI1P50539 228 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 SLC27A3Q5K4L6 730 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 CLEC4GQ6UXB4 293 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 PASD1Q8IV76 773 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 MAP7D3Q8IWC1 876 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 SIX6OS1Q8N1H7 587 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 OR6B3Q8NGW1 331 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 TRIM56Q9BRZ2 755 aaKnown RBP13.98□□□□□ -0.17
PTPRK-207ENST00000368226 SRPRBQ9Y5M8 271 aaKnown RBP13.98□□□□□ -0.17
PTPRK-207ENST00000368226 ERCC6L2Q5T890 1561 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 ABCC3O15438 1527 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 TRIM49BA6NDI0 452 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 ASNSP08243 561 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 TROVE2P10155 538 aaKnown RBP eCLIP13.98□□□□□ -0.17
PTPRK-207ENST00000368226 CYP27A1Q02318 531 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 SEPT6Q14141 434 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 DNAAF3Q8N9W5 541 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 RSRC1Q96IZ7 334 aaKnown RBP13.98□□□□□ -0.17
PTPRK-207ENST00000368226 NUF2Q9BZD4 464 aa13.98□□□□□ -0.17
PTPRK-207ENST00000368226 TYW5A2RUC4 315 aaKnown RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 TTC36A6NLP5 189 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 K7ERI5 159 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 EIF4A3P38919 411 aaKnown RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 FKBP3Q00688 224 aaKnown RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 SPP2Q13103 211 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 SGO2Q562F6 1265 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 CATSPER4Q7RTX7 472 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 TCP1P17987 556 aaKnown RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 BPIFB4P59827 614 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 DARS2Q6PI48 645 aaKnown RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 CACNA2D3Q8IZS8 1091 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 PDE1BQ01064 536 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 MYO1EQ12965 1108 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 CFAP36Q96G28 342 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 ZBED2Q9BTP6 218 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 UBN1Q9NPG3 1134 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 STK17AQ9UEE5 414 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 E9PMD0 336 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 RNF40O75150 1001 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 SSTR3P32745 418 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 ARHGEF6Q15052 776 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 RBBP5Q15291 538 aaKnown RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 NHEJ1Q9H9Q4 299 aaPredicted RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 A0A0G2JLW4 131 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 TMTC3Q6ZXV5 915 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 STAG1Q8WVM7 1258 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 SLITRK6Q9H5Y7 841 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 CACYBPQ9HB71 228 aaKnown RBP13.97□□□□□ -0.17
PTPRK-207ENST00000368226 TBK1Q9UHD2 729 aa13.97□□□□□ -0.17
PTPRK-207ENST00000368226 CLGNO14967 610 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 EEF1GP26641 437 aaKnown RBP13.96□□□□□ -0.17
PTPRK-207ENST00000368226 PLTPP55058 493 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 TOB2Q14106 344 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-207ENST00000368226 CROCCP2Q86T23 111 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 TTC30BQ8N4P2 665 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 AP1M1Q9BXS5 423 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 EFCAB8A8MWE9 144 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 F5H423 210 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-207ENST00000368226 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 SLCO1A2P46721 670 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 POTEDQ86YR6 584 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
PTPRK-207ENST00000368226 DYDC2Q96IM9 177 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 MXD3Q9BW11 206 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 BRIP1Q9BX63 1249 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 ZBTB5O15062 677 aa13.96□□□□□ -0.17
PTPRK-207ENST00000368226 ATP1A3P13637 1013 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms