RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ADAMTS3O15072 1205 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 CTDNEP1O95476 244 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 ARP10275 920 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 XBP1P17861 261 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
CD48-202ENST00000368046 USP11P51784 963 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 FPGSQ05932 587 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 MFSD10Q14728 455 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 KIAA0753Q2KHM9 967 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 LRIT3Q3SXY7 679 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 KIF2CQ99661 725 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 ALG1Q9BT22 464 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 TUT1Q9H6E5 874 aaKnown RBP11.23□□□□□ -0.61
CD48-202ENST00000368046 PCDHA4Q9UN74 947 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 LIMCH1Q9UPQ0 1083 aa11.23□□□□□ -0.61
CD48-202ENST00000368046 CYP2C9P11712 490 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 CYP2C18P33260 490 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 FXR1P51114 621 aaKnown RBP eCLIP11.22□□□□□ -0.61
CD48-202ENST00000368046 PPIGQ13427 754 aaKnown RBP eCLIP11.22□□□□□ -0.61
CD48-202ENST00000368046 SHHQ15465 462 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 PTGISQ16647 500 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 GDF6Q6KF10 455 aaPredicted RBP11.22□□□□□ -0.61
CD48-202ENST00000368046 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 BLIDQ8IZY5 108 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 NECAB1Q8N987 351 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 PPP1R13LQ8WUF5 828 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 WASF1Q92558 559 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 GTF3C6Q969F1 213 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 ZSCAN31Q96LW9 406 aaPredicted RBP11.22□□□□□ -0.61
CD48-202ENST00000368046 NOC4LQ9BVI4 516 aaKnown RBP11.22□□□□□ -0.61
CD48-202ENST00000368046 UPF2Q9HAU5 1272 aaKnown RBP11.22□□□□□ -0.61
CD48-202ENST00000368046 STK36Q9NRP7 1315 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 ORC3Q9UBD5 711 aaPredicted RBP11.22□□□□□ -0.61
CD48-202ENST00000368046 HDAC6Q9UBN7 1215 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 GTF2IRD1Q9UHL9 959 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 NOD1Q9Y239 953 aa11.22□□□□□ -0.61
CD48-202ENST00000368046 NFASCO94856 1347 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 IGLV3-22A0A075B6J6 115 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 GSTTP1A0A1W2PQM5 241 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 FAM86B1E9PN63 330 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 M0R2N6 131 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 LGALS2P05162 132 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 FAM86B2P0C5J1 330 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 ZNF286BP0CG31 522 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 FDPSP14324 419 aaKnown RBP11.21□□□□□ -0.61
CD48-202ENST00000368046 CSF2RAP15509 400 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 CIITAP33076 1130 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 TCF7P36402 384 aaPredicted RBP11.21□□□□□ -0.61
CD48-202ENST00000368046 EPHB4P54760 987 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 CCL23P55773 120 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 SP4Q02446 784 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 UTP14CQ5TAP6 766 aaKnown RBP11.21□□□□□ -0.61
CD48-202ENST00000368046 C16orf59Q7L2K0 433 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 RPUSD2Q8IZ73 545 aaKnown RBP11.21□□□□□ -0.61
CD48-202ENST00000368046 RETREG2Q8NC44 543 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 DAGLBQ8NCG7 672 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 RASGRP4Q8TDF6 673 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 AIFM3Q96NN9 605 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 SDF4Q9BRK5 362 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 RNPEPQ9H4A4 650 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 AGO4Q9HCK5 861 aaKnown RBP11.21□□□□□ -0.61
CD48-202ENST00000368046 PKD2L1Q9P0L9 805 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 SLC9A2Q9UBY0 812 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 TELO2Q9Y4R8 837 aa11.21□□□□□ -0.61
CD48-202ENST00000368046 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
CD48-202ENST00000368046 UMODL1Q5DID0 1318 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 KIAA1217Q5T5P2 1943 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
CD48-202ENST00000368046 EDIL3O43854 480 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 ATG7O95352 703 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 LARGE1O95461 756 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 FGBP02675 491 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 GNAT1P11488 350 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 PTK7Q13308 1070 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 ITGB3BPQ13352 177 aaPredicted RBP11.2□□□□□ -0.62
CD48-202ENST00000368046 BFSP2Q13515 415 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 C9orf50Q5SZB4 431 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 CAGE1Q8TC20 777 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 TBCKQ8TEA7 893 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.62
CD48-202ENST00000368046 SMARCAD1Q9H4L7 1026 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 JPH1Q9HDC5 661 aaPredicted RBP11.2□□□□□ -0.62
CD48-202ENST00000368046 IL23AQ9NPF7 189 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 TBC1D22BQ9NU19 505 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 ZNF215Q9UL58 517 aaPredicted RBP11.2□□□□□ -0.62
CD48-202ENST00000368046 KCNJ14Q9UNX9 436 aa11.2□□□□□ -0.62
CD48-202ENST00000368046 CYP3A7-CYP3A51PA0A087WV96 503 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 C17orf102A2RUQ5 167 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 DHX15O43143 795 aaKnown RBP11.19□□□□□ -0.62
CD48-202ENST00000368046 DTNBO60941 627 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 IQCF3P0C7M6 154 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 CYP3A7P24462 503 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 ACTR2P61160 394 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 ZNF200P98182 395 aaPredicted RBP11.19□□□□□ -0.62
CD48-202ENST00000368046 RABEP1Q15276 862 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 NPY5RQ15761 445 aa11.19□□□□□ -0.62
CD48-202ENST00000368046 TMEM240Q5SV17 173 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms