RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 KCNH2Q12809 1159 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 COASYQ13057 564 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 GRB10Q13322 594 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 KLHDC7AQ5VTJ3 777 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 PDXDC1Q6P996 788 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 UNC13DQ70J99 1090 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 PHLDB2Q86SQ0 1253 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 SYCP3Q8IZU3 236 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 ANKRD2Q9GZV1 360 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 PTPN22Q9Y2R2 807 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 CD2APQ9Y5K6 639 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 GLI3P10071 1580 aa12.08□□□□□ -0.47
NECTIN4-201ENST00000368012 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 DDX39AO00148 427 aaKnown RBP12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 ALKBH5Q6P6C2 394 aaKnown RBP12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 CCT8L2Q96SF2 557 aa12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 TNS2Q63HR2 1409 aa12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 MAGOHP61326 146 aaKnown RBP12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 MAGOHBQ96A72 148 aaKnown RBP12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 MYH2Q9UKX2 1941 aa12.08□□□□□ -0.48
NECTIN4-201ENST00000368012 CLTAP09496 248 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 ZYXQ15942 572 aaKnown RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 AK8Q96MA6 479 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 TRIM51Q9BSJ1 452 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 KCNK9Q9NPC2 374 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 GEMIN8Q9NWZ8 242 aaKnown RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 FBXL5Q9UKA1 691 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 USP17L10C9JJH3 530 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 SERPING1P05155 500 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 PLA2G4BP0C869 781 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 XRCC5P13010 732 aaKnown RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 ITGA4P13612 1032 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 RASA1P20936 1047 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 MRPL12P52815 198 aaKnown RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 GSTO1P78417 241 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 PPP1R7Q15435 360 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 EXOC3L4Q17RC7 722 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 CCDC38Q502W7 563 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 OTUD6AQ7L8S5 288 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 TCP11Q8WWU5 503 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 SH2D3AQ9BRG2 576 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 TACO1Q9BSH4 297 aaKnown RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 MTA3Q9BTC8 594 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 IKZF4Q9H2S9 585 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 TTI1O43156 1089 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 MAP2K1Q02750 393 aaPredicted RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 MEA1Q16626 185 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 ALS2CLQ60I27 953 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 NLRP14Q86W24 1093 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 TPH2Q8IWU9 490 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 MMGT1Q8N4V1 131 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 ZNF473Q8WTR7 871 aaKnown RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 THOC1Q96FV9 657 aaKnown RBP12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 MXD3Q9BW11 206 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 SLC24A3Q9HC58 644 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 HDAC9Q9UKV0 1011 aa12.07□□□□□ -0.48
NECTIN4-201ENST00000368012 SART1O43290 800 aaKnown RBP12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 PPP1R37O75864 691 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 FGGP02679 453 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 SCP2P22307 547 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 HOXA13P31271 388 aaPredicted RBP12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 PTK2Q05397 1052 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 FAM133BQ5BKY9 247 aaKnown RBP12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 RAD54LQ92698 747 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 C7orf25Q9BPX7 421 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 SNX24Q9Y343 169 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 MYH7P12883 1935 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 GBP2P32456 591 aaPredicted RBP12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 SLC35G1Q2M3R5 365 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 MSL1Q68DK7 614 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 PTF1AQ7RTS3 328 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 MYCT1Q8N699 235 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 ARFGAP2Q8N6H7 521 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 ANKRD42Q8N9B4 389 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 UTP11Q9Y3A2 253 aaKnown RBP12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 PCDHA1Q9Y5I3 950 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 ZNF233A6NK53 670 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 SPDYE3A6NKU9 549 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 H2AFZP0C0S5 128 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 NF2P35240 595 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 KCNV1Q6PIU1 500 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 H2AFVQ71UI9 128 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 MMTAG2Q9BU76 263 aaKnown RBP12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 BLOC1S4Q9NUP1 217 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
NECTIN4-201ENST00000368012 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 AKR1B1P15121 316 aa12.05□□□□□ -0.48
NECTIN4-201ENST00000368012 FECHP22830 423 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms